Gene info for HMPREF1078_RS00335 in Parabacteroides merdae CL09T00C40

Annotation: transcription termination factor Rho
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 74,712 to 76,760
See nucleotide sequence around HMPREF1078_RS00335 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00310 and HMPREF1078_RS00315 are separated by 294 nucleotidesHMPREF1078_RS00315 and HMPREF1078_RS00320 are separated by 84 nucleotidesHMPREF1078_RS00320 and HMPREF1078_RS00325 are separated by 1 nucleotidesHMPREF1078_RS00325 and HMPREF1078_RS00330 are separated by 4 nucleotidesHMPREF1078_RS00330 and HMPREF1078_RS00335 are separated by 183 nucleotidesHMPREF1078_RS00335 and HMPREF1078_RS00340 are separated by 166 nucleotidesHMPREF1078_RS00340 and HMPREF1078_RS00345 are separated by 188 nucleotidesHMPREF1078_RS00345 and HMPREF1078_RS00350 are separated by 9 nucleotidesHMPREF1078_RS00350 and HMPREF1078_RS00355 are separated by 4 nucleotidesHMPREF1078_RS00355 and HMPREF1078_RS00360 are separated by 105 nucleotides HMPREF1078_RS00310: HMPREF1078_RS00310 - GH92 family glycosyl hydrolase, at 66,946 to 69,189 _RS00310 HMPREF1078_RS00315: HMPREF1078_RS00315 - aspartate--tRNA ligase, at 69,484 to 71,241 _RS00315 HMPREF1078_RS00320: HMPREF1078_RS00320 - Nif3-like dinuclear metal center hexameric protein, at 71,326 to 72,423 _RS00320 HMPREF1078_RS00325: HMPREF1078_RS00325 - C4-type zinc ribbon domain-containing protein, at 72,425 to 73,189 _RS00325 HMPREF1078_RS00330: HMPREF1078_RS00330 - tRNA lysidine(34) synthetase TilS, at 73,194 to 74,528 _RS00330 HMPREF1078_RS00335: HMPREF1078_RS00335 - transcription termination factor Rho, at 74,712 to 76,760 _RS00335 HMPREF1078_RS00340: HMPREF1078_RS00340 - DEAD/DEAH box helicase, at 76,927 to 78,210 _RS00340 HMPREF1078_RS00345: HMPREF1078_RS00345 - ATP-binding protein, at 78,399 to 79,943 _RS00345 HMPREF1078_RS00350: HMPREF1078_RS00350 - transporter substrate-binding domain-containing protein, at 79,953 to 80,780 _RS00350 HMPREF1078_RS00355: HMPREF1078_RS00355 - putative porin, at 80,785 to 82,896 _RS00355 HMPREF1078_RS00360: HMPREF1078_RS00360 - 2-oxoacid:acceptor oxidoreductase family protein, at 83,002 to 83,556 _RS00360
Locus Name Description Strand Phenotype
HMPREF1078_RS00310 HMPREF1078_RS00310 GH92 family glycosyl hydrolase + insig.
HMPREF1078_RS00315 HMPREF1078_RS00315 aspartate--tRNA ligase + no data
HMPREF1078_RS00320 HMPREF1078_RS00320 Nif3-like dinuclear metal center hexameric protein + insig.
HMPREF1078_RS00325 HMPREF1078_RS00325 C4-type zinc ribbon domain-containing protein + no data
HMPREF1078_RS00330 HMPREF1078_RS00330 tRNA lysidine(34) synthetase TilS + no data
HMPREF1078_RS00335 HMPREF1078_RS00335 transcription termination factor Rho + no data
HMPREF1078_RS00340 HMPREF1078_RS00340 DEAD/DEAH box helicase - strong
HMPREF1078_RS00345 HMPREF1078_RS00345 ATP-binding protein + insig.
HMPREF1078_RS00350 HMPREF1078_RS00350 transporter substrate-binding domain-containing protein - insig.
HMPREF1078_RS00355 HMPREF1078_RS00355 putative porin - no data
HMPREF1078_RS00360 HMPREF1078_RS00360 2-oxoacid:acceptor oxidoreductase family protein - no data

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