Gene info for HMPREF1078_RS00285 in Parabacteroides merdae CL09T00C40

Annotation: threonine--tRNA ligase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 60,938 to 62,893
See nucleotide sequence around HMPREF1078_RS00285 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00260 and HMPREF1078_RS00265 overlap by 4 nucleotidesHMPREF1078_RS00265 and HMPREF1078_RS00270 are separated by 1 nucleotidesHMPREF1078_RS00270 and HMPREF1078_RS00275 overlap by 13 nucleotidesHMPREF1078_RS00275 and HMPREF1078_RS18195 are separated by 194 nucleotidesHMPREF1078_RS18195 and HMPREF1078_RS00285 are separated by 61 nucleotidesHMPREF1078_RS00285 and HMPREF1078_RS00290 are separated by 33 nucleotidesHMPREF1078_RS00290 and HMPREF1078_RS00295 are separated by 59 nucleotidesHMPREF1078_RS00295 and HMPREF1078_RS00300 are separated by 106 nucleotidesHMPREF1078_RS00300 and HMPREF1078_RS00305 are separated by 477 nucleotidesHMPREF1078_RS00305 and HMPREF1078_RS00310 are separated by 44 nucleotides HMPREF1078_RS00260: HMPREF1078_RS00260 - 6-bladed beta-propeller, at 57,279 to 58,502 _RS00260 HMPREF1078_RS00265: HMPREF1078_RS00265 - hypothetical protein, at 58,499 to 59,110 _RS00265 HMPREF1078_RS00270: HMPREF1078_RS00270 - hypothetical protein, at 59,112 to 59,552 _RS00270 HMPREF1078_RS00275: HMPREF1078_RS00275 - signal peptidase I, at 59,540 to 60,211 _RS00275 HMPREF1078_RS18195: HMPREF1078_RS18195 - hypothetical protein, at 60,406 to 60,876 _RS18195 HMPREF1078_RS00285: HMPREF1078_RS00285 - threonine--tRNA ligase, at 60,938 to 62,893 _RS00285 HMPREF1078_RS00290: HMPREF1078_RS00290 - translation initiation factor IF-3, at 62,927 to 63,541 _RS00290 HMPREF1078_RS00295: HMPREF1078_RS00295 - 50S ribosomal protein L35, at 63,601 to 63,798 _RS00295 HMPREF1078_RS00300: HMPREF1078_RS00300 - 50S ribosomal protein L20, at 63,905 to 64,249 _RS00300 HMPREF1078_RS00305: HMPREF1078_RS00305 - family 20 glycosylhydrolase, at 64,727 to 66,901 _RS00305 HMPREF1078_RS00310: HMPREF1078_RS00310 - GH92 family glycosyl hydrolase, at 66,946 to 69,189 _RS00310
Locus Name Description Strand Phenotype
HMPREF1078_RS00260 HMPREF1078_RS00260 6-bladed beta-propeller + insig.
HMPREF1078_RS00265 HMPREF1078_RS00265 hypothetical protein + insig.
HMPREF1078_RS00270 HMPREF1078_RS00270 hypothetical protein + insig.
HMPREF1078_RS00275 HMPREF1078_RS00275 signal peptidase I + insig.
HMPREF1078_RS18195 HMPREF1078_RS18195 hypothetical protein + insig.
HMPREF1078_RS00285 HMPREF1078_RS00285 threonine--tRNA ligase + no data
HMPREF1078_RS00290 HMPREF1078_RS00290 translation initiation factor IF-3 + no data
HMPREF1078_RS00295 HMPREF1078_RS00295 50S ribosomal protein L35 + strong
HMPREF1078_RS00300 HMPREF1078_RS00300 50S ribosomal protein L20 + no data
HMPREF1078_RS00305 HMPREF1078_RS00305 family 20 glycosylhydrolase + insig.
HMPREF1078_RS00310 HMPREF1078_RS00310 GH92 family glycosyl hydrolase + insig.

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