Gene info for HMPREF1078_RS00190 in Parabacteroides merdae CL09T00C40

Annotation: OmpA family protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 44,537 to 45,685
See nucleotide sequence around HMPREF1078_RS00190 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00165 and HMPREF1078_RS00170 are separated by 237 nucleotidesHMPREF1078_RS00170 and HMPREF1078_RS00175 are separated by 198 nucleotidesHMPREF1078_RS00175 and HMPREF1078_RS00180 overlap by 8 nucleotidesHMPREF1078_RS00180 and HMPREF1078_RS00185 are separated by 58 nucleotidesHMPREF1078_RS00185 and HMPREF1078_RS00190 are separated by 110 nucleotidesHMPREF1078_RS00190 and HMPREF1078_RS00195 are separated by 96 nucleotidesHMPREF1078_RS00195 and HMPREF1078_RS00200 are separated by 68 nucleotidesHMPREF1078_RS00200 and HMPREF1078_RS00205 are separated by 5 nucleotidesHMPREF1078_RS00205 and HMPREF1078_RS00210 are separated by 24 nucleotidesHMPREF1078_RS00210 and HMPREF1078_RS00215 are separated by 24 nucleotides HMPREF1078_RS00165: HMPREF1078_RS00165 - DUF4249 domain-containing protein, at 39,247 to 40,254 _RS00165 HMPREF1078_RS00170: HMPREF1078_RS00170 - DUF308 domain-containing protein, at 40,492 to 41,070 _RS00170 HMPREF1078_RS00175: HMPREF1078_RS00175 - glucose-1-phosphate thymidylyltransferase RfbA, at 41,269 to 42,153 _RS00175 HMPREF1078_RS00180: HMPREF1078_RS00180 - GDP-L-fucose synthase, at 42,146 to 43,216 _RS00180 HMPREF1078_RS00185: HMPREF1078_RS00185 - GDP-mannose 4,6-dehydratase, at 43,275 to 44,426 _RS00185 HMPREF1078_RS00190: HMPREF1078_RS00190 - OmpA family protein, at 44,537 to 45,685 _RS00190 HMPREF1078_RS00195: HMPREF1078_RS00195 - undecaprenyl-phosphate glucose phosphotransferase, at 45,782 to 47,179 _RS00195 HMPREF1078_RS00200: HMPREF1078_RS00200 - Holliday junction resolvase RuvX, at 47,248 to 47,670 _RS00200 HMPREF1078_RS00205: HMPREF1078_RS00205 - peptide deformylase, at 47,676 to 48,233 _RS00205 HMPREF1078_RS00210: HMPREF1078_RS00210 - acyl-CoA carboxylase subunit beta, at 48,258 to 49,805 _RS00210 HMPREF1078_RS00215: HMPREF1078_RS00215 - biotin/lipoyl-binding protein, at 49,830 to 50,162 _RS00215
Locus Name Description Strand Phenotype
HMPREF1078_RS00165 HMPREF1078_RS00165 DUF4249 domain-containing protein + insig.
HMPREF1078_RS00170 HMPREF1078_RS00170 DUF308 domain-containing protein - insig.
HMPREF1078_RS00175 HMPREF1078_RS00175 glucose-1-phosphate thymidylyltransferase RfbA + no data
HMPREF1078_RS00180 HMPREF1078_RS00180 GDP-L-fucose synthase + strong
HMPREF1078_RS00185 HMPREF1078_RS00185 GDP-mannose 4,6-dehydratase + strong
HMPREF1078_RS00190 HMPREF1078_RS00190 OmpA family protein + strong
HMPREF1078_RS00195 HMPREF1078_RS00195 undecaprenyl-phosphate glucose phosphotransferase + strong
HMPREF1078_RS00200 HMPREF1078_RS00200 Holliday junction resolvase RuvX + no data
HMPREF1078_RS00205 HMPREF1078_RS00205 peptide deformylase + no data
HMPREF1078_RS00210 HMPREF1078_RS00210 acyl-CoA carboxylase subunit beta + cofit
HMPREF1078_RS00215 HMPREF1078_RS00215 biotin/lipoyl-binding protein + cofit

Or browse nearby genes

Or see the comparative fitness browser