Gene info for HMPREF1078_RS00065 in Parabacteroides merdae CL09T00C40

Annotation: class I SAM-dependent methyltransferase
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 15,874 to 16,863
See nucleotide sequence around HMPREF1078_RS00065 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00040 and HMPREF1078_RS00045 overlap by 4 nucleotidesHMPREF1078_RS00045 and HMPREF1078_RS00050 are separated by 30 nucleotidesHMPREF1078_RS00050 and HMPREF1078_RS00055 are separated by 288 nucleotidesHMPREF1078_RS00055 and HMPREF1078_RS00060 are separated by 108 nucleotidesHMPREF1078_RS00060 and HMPREF1078_RS00065 are separated by 76 nucleotidesHMPREF1078_RS00065 and HMPREF1078_RS00070 overlap by 11 nucleotidesHMPREF1078_RS00070 and HMPREF1078_RS00075 are separated by 5 nucleotidesHMPREF1078_RS00075 and HMPREF1078_RS00080 overlap by 4 nucleotidesHMPREF1078_RS00080 and HMPREF1078_RS00085 are separated by 14 nucleotidesHMPREF1078_RS00085 and HMPREF1078_RS00090 are separated by 7 nucleotides HMPREF1078_RS00040: HMPREF1078_RS00040 - glycoside hydrolase family 31 protein, at 8,746 to 11,130 _RS00040 HMPREF1078_RS00045: HMPREF1078_RS00045 - hypothetical protein, at 11,127 to 11,507 _RS00045 HMPREF1078_RS00050: HMPREF1078_RS00050 - FAD:protein FMN transferase, at 11,538 to 12,545 _RS00050 HMPREF1078_RS00055: HMPREF1078_RS00055 - ferrous iron transport protein B, at 12,834 to 15,314 _RS00055 HMPREF1078_RS00060: HMPREF1078_RS00060 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 15,423 to 15,797 _RS00060 HMPREF1078_RS00065: HMPREF1078_RS00065 - class I SAM-dependent methyltransferase, at 15,874 to 16,863 _RS00065 HMPREF1078_RS00070: HMPREF1078_RS00070 - glycosyltransferase, at 16,853 to 17,980 _RS00070 HMPREF1078_RS00075: HMPREF1078_RS00075 - glycosyltransferase, at 17,986 to 19,227 _RS00075 HMPREF1078_RS00080: HMPREF1078_RS00080 - polysaccharide deacetylase family protein, at 19,224 to 20,540 _RS00080 HMPREF1078_RS00085: HMPREF1078_RS00085 - PIG-L family deacetylase, at 20,555 to 21,193 _RS00085 HMPREF1078_RS00090: HMPREF1078_RS00090 - GNAT family N-acetyltransferase, at 21,201 to 22,160 _RS00090
Locus Name Description Strand Phenotype
HMPREF1078_RS00040 HMPREF1078_RS00040 glycoside hydrolase family 31 protein + insig.
HMPREF1078_RS00045 HMPREF1078_RS00045 hypothetical protein - insig.
HMPREF1078_RS00050 HMPREF1078_RS00050 FAD:protein FMN transferase - no data
HMPREF1078_RS00055 HMPREF1078_RS00055 ferrous iron transport protein B - sig.
HMPREF1078_RS00060 HMPREF1078_RS00060 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase + insig.
HMPREF1078_RS00065 HMPREF1078_RS00065 class I SAM-dependent methyltransferase - sig.
HMPREF1078_RS00070 HMPREF1078_RS00070 glycosyltransferase - strong
HMPREF1078_RS00075 HMPREF1078_RS00075 glycosyltransferase - strong
HMPREF1078_RS00080 HMPREF1078_RS00080 polysaccharide deacetylase family protein - strong
HMPREF1078_RS00085 HMPREF1078_RS00085 PIG-L family deacetylase - strong
HMPREF1078_RS00090 HMPREF1078_RS00090 GNAT family N-acetyltransferase - strong

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