Gene info for HMPREF1078_RS00045 in Parabacteroides merdae CL09T00C40

Annotation: hypothetical protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, - strand, nucleotides 11,127 to 11,507
See nucleotide sequence around HMPREF1078_RS00045 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS00020 and HMPREF1078_RS00025 overlap by 4 nucleotidesHMPREF1078_RS00025 and HMPREF1078_RS00030 overlap by 8 nucleotidesHMPREF1078_RS00030 and HMPREF1078_RS00035 are separated by 23 nucleotidesHMPREF1078_RS00035 and HMPREF1078_RS00040 are separated by 91 nucleotidesHMPREF1078_RS00040 and HMPREF1078_RS00045 overlap by 4 nucleotidesHMPREF1078_RS00045 and HMPREF1078_RS00050 are separated by 30 nucleotidesHMPREF1078_RS00050 and HMPREF1078_RS00055 are separated by 288 nucleotidesHMPREF1078_RS00055 and HMPREF1078_RS00060 are separated by 108 nucleotidesHMPREF1078_RS00060 and HMPREF1078_RS00065 are separated by 76 nucleotidesHMPREF1078_RS00065 and HMPREF1078_RS00070 overlap by 11 nucleotides HMPREF1078_RS00020: HMPREF1078_RS00020 - nitroreductase family protein, at 6,202 to 6,762 _RS00020 HMPREF1078_RS00025: HMPREF1078_RS00025 - Rossmann-like and DUF2520 domain-containing protein, at 6,759 to 7,526 _RS00025 HMPREF1078_RS00030: HMPREF1078_RS00030 - HAD-IIIA family hydrolase, at 7,519 to 8,040 _RS00030 HMPREF1078_RS00035: HMPREF1078_RS00035 - Maf-like protein, at 8,064 to 8,654 _RS00035 HMPREF1078_RS00040: HMPREF1078_RS00040 - glycoside hydrolase family 31 protein, at 8,746 to 11,130 _RS00040 HMPREF1078_RS00045: HMPREF1078_RS00045 - hypothetical protein, at 11,127 to 11,507 _RS00045 HMPREF1078_RS00050: HMPREF1078_RS00050 - FAD:protein FMN transferase, at 11,538 to 12,545 _RS00050 HMPREF1078_RS00055: HMPREF1078_RS00055 - ferrous iron transport protein B, at 12,834 to 15,314 _RS00055 HMPREF1078_RS00060: HMPREF1078_RS00060 - 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase, at 15,423 to 15,797 _RS00060 HMPREF1078_RS00065: HMPREF1078_RS00065 - class I SAM-dependent methyltransferase, at 15,874 to 16,863 _RS00065 HMPREF1078_RS00070: HMPREF1078_RS00070 - glycosyltransferase, at 16,853 to 17,980 _RS00070
Locus Name Description Strand Phenotype
HMPREF1078_RS00020 HMPREF1078_RS00020 nitroreductase family protein + insig.
HMPREF1078_RS00025 HMPREF1078_RS00025 Rossmann-like and DUF2520 domain-containing protein + strong
HMPREF1078_RS00030 HMPREF1078_RS00030 HAD-IIIA family hydrolase + strong
HMPREF1078_RS00035 HMPREF1078_RS00035 Maf-like protein + insig.
HMPREF1078_RS00040 HMPREF1078_RS00040 glycoside hydrolase family 31 protein + insig.
HMPREF1078_RS00045 HMPREF1078_RS00045 hypothetical protein - insig.
HMPREF1078_RS00050 HMPREF1078_RS00050 FAD:protein FMN transferase - no data
HMPREF1078_RS00055 HMPREF1078_RS00055 ferrous iron transport protein B - sig.
HMPREF1078_RS00060 HMPREF1078_RS00060 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase + insig.
HMPREF1078_RS00065 HMPREF1078_RS00065 class I SAM-dependent methyltransferase - sig.
HMPREF1078_RS00070 HMPREF1078_RS00070 glycosyltransferase - strong

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