Gene info for HMPREF1078_RS00025 in Parabacteroides merdae CL09T00C40

Annotation: Rossmann-like and DUF2520 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 6,759 to 7,526
See nucleotide sequence around HMPREF1078_RS00025 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS19660 and HMPREF1078_RS00005 are separated by 215 nucleotidesHMPREF1078_RS00005 and HMPREF1078_RS00010 overlap by 4 nucleotidesHMPREF1078_RS00010 and HMPREF1078_RS00015 are separated by 5 nucleotidesHMPREF1078_RS00015 and HMPREF1078_RS00020 are separated by 120 nucleotidesHMPREF1078_RS00020 and HMPREF1078_RS00025 overlap by 4 nucleotidesHMPREF1078_RS00025 and HMPREF1078_RS00030 overlap by 8 nucleotidesHMPREF1078_RS00030 and HMPREF1078_RS00035 are separated by 23 nucleotidesHMPREF1078_RS00035 and HMPREF1078_RS00040 are separated by 91 nucleotidesHMPREF1078_RS00040 and HMPREF1078_RS00045 overlap by 4 nucleotidesHMPREF1078_RS00045 and HMPREF1078_RS00050 are separated by 30 nucleotides HMPREF1078_RS19660: HMPREF1078_RS19660 - hypothetical protein, at 1 to 198 _RS19660 HMPREF1078_RS00005: HMPREF1078_RS00005 - efflux RND transporter periplasmic adaptor subunit, at 414 to 1,580 _RS00005 HMPREF1078_RS00010: HMPREF1078_RS00010 - multidrug efflux RND transporter permease subunit, at 1,577 to 4,705 _RS00010 HMPREF1078_RS00015: HMPREF1078_RS00015 - efflux transporter outer membrane subunit, at 4,711 to 6,081 _RS00015 HMPREF1078_RS00020: HMPREF1078_RS00020 - nitroreductase family protein, at 6,202 to 6,762 _RS00020 HMPREF1078_RS00025: HMPREF1078_RS00025 - Rossmann-like and DUF2520 domain-containing protein, at 6,759 to 7,526 _RS00025 HMPREF1078_RS00030: HMPREF1078_RS00030 - HAD-IIIA family hydrolase, at 7,519 to 8,040 _RS00030 HMPREF1078_RS00035: HMPREF1078_RS00035 - Maf-like protein, at 8,064 to 8,654 _RS00035 HMPREF1078_RS00040: HMPREF1078_RS00040 - glycoside hydrolase family 31 protein, at 8,746 to 11,130 _RS00040 HMPREF1078_RS00045: HMPREF1078_RS00045 - hypothetical protein, at 11,127 to 11,507 _RS00045 HMPREF1078_RS00050: HMPREF1078_RS00050 - FAD:protein FMN transferase, at 11,538 to 12,545 _RS00050
Locus Name Description Strand Phenotype
HMPREF1078_RS19660 HMPREF1078_RS19660 hypothetical protein - insig.
HMPREF1078_RS00005 HMPREF1078_RS00005 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS00010 HMPREF1078_RS00010 multidrug efflux RND transporter permease subunit + insig.
HMPREF1078_RS00015 HMPREF1078_RS00015 efflux transporter outer membrane subunit + insig.
HMPREF1078_RS00020 HMPREF1078_RS00020 nitroreductase family protein + insig.
HMPREF1078_RS00025 HMPREF1078_RS00025 Rossmann-like and DUF2520 domain-containing protein + strong
HMPREF1078_RS00030 HMPREF1078_RS00030 HAD-IIIA family hydrolase + strong
HMPREF1078_RS00035 HMPREF1078_RS00035 Maf-like protein + insig.
HMPREF1078_RS00040 HMPREF1078_RS00040 glycoside hydrolase family 31 protein + insig.
HMPREF1078_RS00045 HMPREF1078_RS00045 hypothetical protein - insig.
HMPREF1078_RS00050 HMPREF1078_RS00050 FAD:protein FMN transferase - no data

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