Gene info for HMPREF1078_RS00005 in Parabacteroides merdae CL09T00C40

Annotation: efflux RND transporter periplasmic adaptor subunit
Type 1: Protein-coding gene
Located on scaffold NZ_JH976524, + strand, nucleotides 414 to 1,580
See nucleotide sequence around HMPREF1078_RS00005 or for all of scaffold NZ_JH976524

Other databases: NCBI

Nearby Genes

500 ntHMPREF1078_RS19660 and HMPREF1078_RS00005 are separated by 215 nucleotidesHMPREF1078_RS00005 and HMPREF1078_RS00010 overlap by 4 nucleotidesHMPREF1078_RS00010 and HMPREF1078_RS00015 are separated by 5 nucleotidesHMPREF1078_RS00015 and HMPREF1078_RS00020 are separated by 120 nucleotidesHMPREF1078_RS00020 and HMPREF1078_RS00025 overlap by 4 nucleotidesHMPREF1078_RS00025 and HMPREF1078_RS00030 overlap by 8 nucleotides HMPREF1078_RS19660: HMPREF1078_RS19660 - hypothetical protein, at 1 to 198 _RS19660 HMPREF1078_RS00005: HMPREF1078_RS00005 - efflux RND transporter periplasmic adaptor subunit, at 414 to 1,580 _RS00005 HMPREF1078_RS00010: HMPREF1078_RS00010 - multidrug efflux RND transporter permease subunit, at 1,577 to 4,705 _RS00010 HMPREF1078_RS00015: HMPREF1078_RS00015 - efflux transporter outer membrane subunit, at 4,711 to 6,081 _RS00015 HMPREF1078_RS00020: HMPREF1078_RS00020 - nitroreductase family protein, at 6,202 to 6,762 _RS00020 HMPREF1078_RS00025: HMPREF1078_RS00025 - Rossmann-like and DUF2520 domain-containing protein, at 6,759 to 7,526 _RS00025 HMPREF1078_RS00030: HMPREF1078_RS00030 - HAD-IIIA family hydrolase, at 7,519 to 8,040 _RS00030
Locus Name Description Strand Phenotype
HMPREF1078_RS19660 HMPREF1078_RS19660 hypothetical protein - insig.
HMPREF1078_RS00005 HMPREF1078_RS00005 efflux RND transporter periplasmic adaptor subunit + insig.
HMPREF1078_RS00010 HMPREF1078_RS00010 multidrug efflux RND transporter permease subunit + insig.
HMPREF1078_RS00015 HMPREF1078_RS00015 efflux transporter outer membrane subunit + insig.
HMPREF1078_RS00020 HMPREF1078_RS00020 nitroreductase family protein + insig.
HMPREF1078_RS00025 HMPREF1078_RS00025 Rossmann-like and DUF2520 domain-containing protein + strong
HMPREF1078_RS00030 HMPREF1078_RS00030 HAD-IIIA family hydrolase + strong

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