Gene info for HMPREF1058_RS14040 in Phocaeicola vulgatus CL09T03C04

Annotation: AAA family ATPase
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,301,619 to 1,303,037
See nucleotide sequence around HMPREF1058_RS14040 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I9J4Z6

Nearby Genes

500 ntHMPREF1058_RS14065 and HMPREF1058_RS14060 are separated by 101 nucleotidesHMPREF1058_RS14060 and HMPREF1058_RS14055 are separated by 91 nucleotidesHMPREF1058_RS14055 and HMPREF1058_RS14050 are separated by 33 nucleotidesHMPREF1058_RS14050 and HMPREF1058_RS14045 are separated by 139 nucleotidesHMPREF1058_RS14045 and HMPREF1058_RS14040 are separated by 321 nucleotidesHMPREF1058_RS14040 and HMPREF1058_RS14035 are separated by 97 nucleotidesHMPREF1058_RS14035 and HMPREF1058_RS14030 are separated by 2 nucleotidesHMPREF1058_RS14030 and HMPREF1058_RS14025 overlap by 10 nucleotidesHMPREF1058_RS14025 and HMPREF1058_RS14020 overlap by 32 nucleotidesHMPREF1058_RS14020 and HMPREF1058_RS14015 are separated by 92 nucleotides HMPREF1058_RS14065: HMPREF1058_RS14065 - lytic transglycosylase domain-containing protein, at 1,293,464 to 1,294,726 _RS14065 HMPREF1058_RS14060: HMPREF1058_RS14060 - bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase, at 1,294,828 to 1,297,098 _RS14060 HMPREF1058_RS14055: HMPREF1058_RS14055 - MerR family transcriptional regulator, at 1,297,190 to 1,297,537 _RS14055 HMPREF1058_RS14050: HMPREF1058_RS14050 - peptidoglycan DD-metalloendopeptidase family protein, at 1,297,571 to 1,298,539 _RS14050 HMPREF1058_RS14045: HMPREF1058_RS14045 - alanine--tRNA ligase, at 1,298,679 to 1,301,297 _RS14045 HMPREF1058_RS14040: HMPREF1058_RS14040 - AAA family ATPase, at 1,301,619 to 1,303,037 _RS14040 HMPREF1058_RS14035: HMPREF1058_RS14035 - hypothetical protein, at 1,303,135 to 1,303,821 _RS14035 HMPREF1058_RS14030: HMPREF1058_RS14030 - DUF3822 family protein, at 1,303,824 to 1,304,648 _RS14030 HMPREF1058_RS14025: HMPREF1058_RS14025 - RsmD family RNA methyltransferase, at 1,304,639 to 1,305,199 _RS14025 HMPREF1058_RS14020: HMPREF1058_RS14020 - cardiolipin synthase, at 1,305,168 to 1,306,604 _RS14020 HMPREF1058_RS14015: HMPREF1058_RS14015 - TonB-dependent receptor, at 1,306,697 to 1,309,594 _RS14015
Locus Name Description Strand Phenotype
HMPREF1058_RS14065 HMPREF1058_RS14065 lytic transglycosylase domain-containing protein + sig.
HMPREF1058_RS14060 HMPREF1058_RS14060 bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase + no data
HMPREF1058_RS14055 HMPREF1058_RS14055 MerR family transcriptional regulator - no data
HMPREF1058_RS14050 HMPREF1058_RS14050 peptidoglycan DD-metalloendopeptidase family protein - strong
HMPREF1058_RS14045 HMPREF1058_RS14045 alanine--tRNA ligase + no data
HMPREF1058_RS14040 HMPREF1058_RS14040 AAA family ATPase - insig.
HMPREF1058_RS14035 HMPREF1058_RS14035 hypothetical protein + strong
HMPREF1058_RS14030 HMPREF1058_RS14030 DUF3822 family protein + strong
HMPREF1058_RS14025 HMPREF1058_RS14025 RsmD family RNA methyltransferase + sig.
HMPREF1058_RS14020 HMPREF1058_RS14020 cardiolipin synthase - strong
HMPREF1058_RS14015 HMPREF1058_RS14015 TonB-dependent receptor - insig.

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