Gene info for HMPREF1058_RS14015 in Phocaeicola vulgatus CL09T03C04

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,306,697 to 1,309,594
See nucleotide sequence around HMPREF1058_RS14015 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I9J4Z9

Nearby Genes

500 ntHMPREF1058_RS14040 and HMPREF1058_RS14035 are separated by 97 nucleotidesHMPREF1058_RS14035 and HMPREF1058_RS14030 are separated by 2 nucleotidesHMPREF1058_RS14030 and HMPREF1058_RS14025 overlap by 10 nucleotidesHMPREF1058_RS14025 and HMPREF1058_RS14020 overlap by 32 nucleotidesHMPREF1058_RS14020 and HMPREF1058_RS14015 are separated by 92 nucleotidesHMPREF1058_RS14015 and HMPREF1058_RS14010 are separated by 80 nucleotidesHMPREF1058_RS14010 and HMPREF1058_RS14005 are separated by 97 nucleotidesHMPREF1058_RS14005 and HMPREF1058_RS14000 are separated by 273 nucleotidesHMPREF1058_RS14000 and HMPREF1058_RS13995 are separated by 100 nucleotidesHMPREF1058_RS13995 and HMPREF1058_RS13990 are separated by 264 nucleotides HMPREF1058_RS14040: HMPREF1058_RS14040 - AAA family ATPase, at 1,301,619 to 1,303,037 _RS14040 HMPREF1058_RS14035: HMPREF1058_RS14035 - hypothetical protein, at 1,303,135 to 1,303,821 _RS14035 HMPREF1058_RS14030: HMPREF1058_RS14030 - DUF3822 family protein, at 1,303,824 to 1,304,648 _RS14030 HMPREF1058_RS14025: HMPREF1058_RS14025 - RsmD family RNA methyltransferase, at 1,304,639 to 1,305,199 _RS14025 HMPREF1058_RS14020: HMPREF1058_RS14020 - cardiolipin synthase, at 1,305,168 to 1,306,604 _RS14020 HMPREF1058_RS14015: HMPREF1058_RS14015 - TonB-dependent receptor, at 1,306,697 to 1,309,594 _RS14015 HMPREF1058_RS14010: HMPREF1058_RS14010 - hypothetical protein, at 1,309,675 to 1,310,079 _RS14010 HMPREF1058_RS14005: HMPREF1058_RS14005 - 3-dehydroquinate synthase, at 1,310,177 to 1,311,238 _RS14005 HMPREF1058_RS14000: HMPREF1058_RS14000 - helix-turn-helix domain-containing protein, at 1,311,512 to 1,312,372 _RS14000 HMPREF1058_RS13995: HMPREF1058_RS13995 - tRNA-Pro, at 1,312,473 to 1,312,547 _RS13995 HMPREF1058_RS13990: HMPREF1058_RS13990 - DNA polymerase IV, at 1,312,812 to 1,313,906 _RS13990
Locus Name Description Strand Phenotype
HMPREF1058_RS14040 HMPREF1058_RS14040 AAA family ATPase - insig.
HMPREF1058_RS14035 HMPREF1058_RS14035 hypothetical protein + strong
HMPREF1058_RS14030 HMPREF1058_RS14030 DUF3822 family protein + strong
HMPREF1058_RS14025 HMPREF1058_RS14025 RsmD family RNA methyltransferase + sig.
HMPREF1058_RS14020 HMPREF1058_RS14020 cardiolipin synthase - strong
HMPREF1058_RS14015 HMPREF1058_RS14015 TonB-dependent receptor - insig.
HMPREF1058_RS14010 HMPREF1058_RS14010 hypothetical protein - insig.
HMPREF1058_RS14005 HMPREF1058_RS14005 3-dehydroquinate synthase + strong
HMPREF1058_RS14000 HMPREF1058_RS14000 helix-turn-helix domain-containing protein + cofit
HMPREF1058_RS13995 HMPREF1058_RS13995 tRNA-Pro + no data
HMPREF1058_RS13990 HMPREF1058_RS13990 DNA polymerase IV + insig.

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