Gene info for HMPREF1058_RS13885 in Phocaeicola vulgatus CL09T03C04

Annotation: peptidase S41
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,330,781 to 1,332,220
See nucleotide sequence around HMPREF1058_RS13885 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I9J521

Nearby Genes

500 ntHMPREF1058_RS13910 and HMPREF1058_RS13905 are separated by 1 nucleotidesHMPREF1058_RS13905 and HMPREF1058_RS13900 are separated by 75 nucleotidesHMPREF1058_RS13900 and HMPREF1058_RS13895 are separated by 17 nucleotidesHMPREF1058_RS13895 and HMPREF1058_RS13890 overlap by 17 nucleotidesHMPREF1058_RS13890 and HMPREF1058_RS13885 overlap by 4 nucleotidesHMPREF1058_RS13885 and HMPREF1058_RS13880 are separated by 158 nucleotidesHMPREF1058_RS13880 and HMPREF1058_RS13875 are separated by 38 nucleotidesHMPREF1058_RS13875 and HMPREF1058_RS13870 are separated by 257 nucleotidesHMPREF1058_RS13870 and HMPREF1058_RS13865 are separated by 54 nucleotidesHMPREF1058_RS13865 and HMPREF1058_RS13860 are separated by 24 nucleotides HMPREF1058_RS13910: HMPREF1058_RS13910 - nucleoside deaminase, at 1,328,549 to 1,328,983 _RS13910 HMPREF1058_RS13905: HMPREF1058_RS13905 - hypothetical protein, at 1,328,985 to 1,329,218 _RS13905 HMPREF1058_RS13900: HMPREF1058_RS13900 - YraN family protein, at 1,329,294 to 1,329,659 _RS13900 HMPREF1058_RS13895: HMPREF1058_RS13895 - MmcQ/YjbR family DNA-binding protein, at 1,329,677 to 1,330,033 _RS13895 HMPREF1058_RS13890: HMPREF1058_RS13890 - biotin--[acetyl-CoA-carboxylase] ligase, at 1,330,017 to 1,330,784 _RS13890 HMPREF1058_RS13885: HMPREF1058_RS13885 - peptidase S41, at 1,330,781 to 1,332,220 _RS13885 HMPREF1058_RS13880: HMPREF1058_RS13880 - MATE family efflux transporter, at 1,332,379 to 1,333,704 _RS13880 HMPREF1058_RS13875: HMPREF1058_RS13875 - UMP kinase, at 1,333,743 to 1,334,453 _RS13875 HMPREF1058_RS13870: HMPREF1058_RS13870 - glycoside hydrolase family 88 protein, at 1,334,711 to 1,335,949 _RS13870 HMPREF1058_RS13865: HMPREF1058_RS13865 - glycoside hydrolase N-terminal domain-containing protein, at 1,336,004 to 1,338,112 _RS13865 HMPREF1058_RS13860: HMPREF1058_RS13860 - DUF4450 domain-containing protein, at 1,338,137 to 1,341,394 _RS13860
Locus Name Description Strand Phenotype
HMPREF1058_RS13910 HMPREF1058_RS13910 nucleoside deaminase - strong
HMPREF1058_RS13905 HMPREF1058_RS13905 hypothetical protein - cofit
HMPREF1058_RS13900 HMPREF1058_RS13900 YraN family protein + sig.
HMPREF1058_RS13895 HMPREF1058_RS13895 MmcQ/YjbR family DNA-binding protein + insig.
HMPREF1058_RS13890 HMPREF1058_RS13890 biotin--[acetyl-CoA-carboxylase] ligase + no data
HMPREF1058_RS13885 HMPREF1058_RS13885 peptidase S41 - insig.
HMPREF1058_RS13880 HMPREF1058_RS13880 MATE family efflux transporter + sig.
HMPREF1058_RS13875 HMPREF1058_RS13875 UMP kinase + no data
HMPREF1058_RS13870 HMPREF1058_RS13870 glycoside hydrolase family 88 protein + insig.
HMPREF1058_RS13865 HMPREF1058_RS13865 glycoside hydrolase N-terminal domain-containing protein + insig.
HMPREF1058_RS13860 HMPREF1058_RS13860 DUF4450 domain-containing protein + insig.

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