Gene info for HMPREF1058_RS13530 in Phocaeicola vulgatus CL09T03C04

Annotation: glycoside hydrolase family 88 protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,454,794 to 1,456,023
See nucleotide sequence around HMPREF1058_RS13530 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I9UDX2

Nearby Genes

500 ntHMPREF1058_RS13555 and HMPREF1058_RS13550 are separated by 540 nucleotidesHMPREF1058_RS13550 and HMPREF1058_RS13545 are separated by 379 nucleotidesHMPREF1058_RS13545 and HMPREF1058_RS13540 are separated by 32 nucleotidesHMPREF1058_RS13540 and HMPREF1058_RS13535 are separated by 217 nucleotidesHMPREF1058_RS13535 and HMPREF1058_RS13530 are separated by 14 nucleotidesHMPREF1058_RS13530 and HMPREF1058_RS13525 are separated by 289 nucleotidesHMPREF1058_RS13525 and HMPREF1058_RS13520 are separated by 18 nucleotidesHMPREF1058_RS13520 and HMPREF1058_RS13515 are separated by 219 nucleotidesHMPREF1058_RS13515 and HMPREF1058_RS13510 are separated by 53 nucleotidesHMPREF1058_RS13510 and HMPREF1058_RS13505 are separated by 21 nucleotides HMPREF1058_RS13555: HMPREF1058_RS13555 - hypothetical protein, at 1,442,686 to 1,445,232 _RS13555 HMPREF1058_RS13550: HMPREF1058_RS13550 - SUMF1/EgtB/PvdO family nonheme iron enzyme, at 1,445,773 to 1,447,761 _RS13550 HMPREF1058_RS13545: HMPREF1058_RS13545 - RagB/SusD family nutrient uptake outer membrane protein, at 1,448,141 to 1,450,306 _RS13545 HMPREF1058_RS13540: HMPREF1058_RS13540 - TonB-dependent receptor, at 1,450,339 to 1,453,611 _RS13540 HMPREF1058_RS13535: HMPREF1058_RS13535 - pectinesterase, at 1,453,829 to 1,454,779 _RS13535 HMPREF1058_RS13530: HMPREF1058_RS13530 - glycoside hydrolase family 88 protein, at 1,454,794 to 1,456,023 _RS13530 HMPREF1058_RS13525: HMPREF1058_RS13525 - PTS sugar transporter subunit IIC, at 1,456,313 to 1,457,704 _RS13525 HMPREF1058_RS13520: HMPREF1058_RS13520 - 5-dehydro-4-deoxy-D-glucuronate isomerase, at 1,457,723 to 1,458,679 _RS13520 HMPREF1058_RS13515: HMPREF1058_RS13515 - MFS transporter, at 1,458,899 to 1,460,374 _RS13515 HMPREF1058_RS13510: HMPREF1058_RS13510 - AAA family ATPase, at 1,460,428 to 1,463,754 _RS13510 HMPREF1058_RS13505: HMPREF1058_RS13505 - hypothetical protein, at 1,463,776 to 1,464,516 _RS13505
Locus Name Description Strand Phenotype
HMPREF1058_RS13555 HMPREF1058_RS13555 hypothetical protein - insig.
HMPREF1058_RS13550 HMPREF1058_RS13550 SUMF1/EgtB/PvdO family nonheme iron enzyme - insig.
HMPREF1058_RS13545 HMPREF1058_RS13545 RagB/SusD family nutrient uptake outer membrane protein - strong
HMPREF1058_RS13540 HMPREF1058_RS13540 TonB-dependent receptor - strong
HMPREF1058_RS13535 HMPREF1058_RS13535 pectinesterase - insig.
HMPREF1058_RS13530 HMPREF1058_RS13530 glycoside hydrolase family 88 protein - insig.
HMPREF1058_RS13525 HMPREF1058_RS13525 PTS sugar transporter subunit IIC + strong
HMPREF1058_RS13520 HMPREF1058_RS13520 5-dehydro-4-deoxy-D-glucuronate isomerase + strong
HMPREF1058_RS13515 HMPREF1058_RS13515 MFS transporter + strong
HMPREF1058_RS13510 HMPREF1058_RS13510 AAA family ATPase - sig.
HMPREF1058_RS13505 HMPREF1058_RS13505 hypothetical protein - insig.

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