Gene info for HMPREF1058_RS13410 in Phocaeicola vulgatus CL09T03C04

Annotation: SusC/RagA family TonB-linked outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, + strand, nucleotides 1,501,384 to 1,504,815
See nucleotide sequence around HMPREF1058_RS13410 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I8ZYW7

Nearby Genes

500 ntHMPREF1058_RS0119485 and HMPREF1058_RS13430 are separated by 124 nucleotidesHMPREF1058_RS13430 and HMPREF1058_RS13425 are separated by 328 nucleotidesHMPREF1058_RS13425 and HMPREF1058_RS13420 are separated by 192 nucleotidesHMPREF1058_RS13420 and HMPREF1058_RS13415 are separated by 143 nucleotidesHMPREF1058_RS13415 and HMPREF1058_RS13410 are separated by 208 nucleotidesHMPREF1058_RS13410 and HMPREF1058_RS13405 are separated by 14 nucleotidesHMPREF1058_RS13405 and HMPREF1058_RS13400 are separated by 4 nucleotidesHMPREF1058_RS13400 and HMPREF1058_RS0119490 are separated by 254 nucleotidesHMPREF1058_RS0119490 and HMPREF1058_RS0119495 are separated by 1 nucleotidesHMPREF1058_RS0119495 and HMPREF1058_RS13395 are separated by 313 nucleotides HMPREF1058_RS0119485: HMPREF1058_RS0119485 - DUF1573 domain-containing protein, at 1,496,459 to 1,496,728 _RS0119485 HMPREF1058_RS13430: HMPREF1058_RS13430 - DUF3874 domain-containing protein, at 1,496,853 to 1,498,250 _RS13430 HMPREF1058_RS13425: HMPREF1058_RS13425 - HU family DNA-binding protein, at 1,498,579 to 1,499,259 _RS13425 HMPREF1058_RS13420: HMPREF1058_RS13420 - RNA polymerase sigma-70 factor, at 1,499,452 to 1,500,018 _RS13420 HMPREF1058_RS13415: HMPREF1058_RS13415 - FecR family protein, at 1,500,162 to 1,501,175 _RS13415 HMPREF1058_RS13410: HMPREF1058_RS13410 - SusC/RagA family TonB-linked outer membrane protein, at 1,501,384 to 1,504,815 _RS13410 HMPREF1058_RS13405: HMPREF1058_RS13405 - RagB/SusD family nutrient uptake outer membrane protein, at 1,504,830 to 1,506,632 _RS13405 HMPREF1058_RS13400: HMPREF1058_RS13400 - sulfatase, at 1,506,637 to 1,508,070 _RS13400 HMPREF1058_RS0119490: HMPREF1058_RS0119490 - DDE transposase, at 1,508,325 to 1,508,600 _RS0119490 HMPREF1058_RS0119495: HMPREF1058_RS0119495 - family 43 glycosylhydrolase, at 1,508,602 to 1,509,288 _RS0119495 HMPREF1058_RS13395: HMPREF1058_RS13395 - Fic family protein, at 1,509,602 to 1,510,603 _RS13395
Locus Name Description Strand Phenotype
HMPREF1058_RS0119485 HMPREF1058_RS0119485 DUF1573 domain-containing protein - insig.
HMPREF1058_RS13430 HMPREF1058_RS13430 DUF3874 domain-containing protein - insig.
HMPREF1058_RS13425 HMPREF1058_RS13425 HU family DNA-binding protein + strong
HMPREF1058_RS13420 HMPREF1058_RS13420 RNA polymerase sigma-70 factor - insig.
HMPREF1058_RS13415 HMPREF1058_RS13415 FecR family protein + insig.
HMPREF1058_RS13410 HMPREF1058_RS13410 SusC/RagA family TonB-linked outer membrane protein + insig.
HMPREF1058_RS13405 HMPREF1058_RS13405 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1058_RS13400 HMPREF1058_RS13400 sulfatase + insig.
HMPREF1058_RS0119490 HMPREF1058_RS0119490 DDE transposase - insig.
HMPREF1058_RS0119495 HMPREF1058_RS0119495 family 43 glycosylhydrolase + insig.
HMPREF1058_RS13395 HMPREF1058_RS13395 Fic family protein + insig.

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