Gene info for HMPREF1058_RS13175 in Phocaeicola vulgatus CL09T03C04

Annotation: SusC/RagA family TonB-linked outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,568,527 to 1,571,295
See nucleotide sequence around HMPREF1058_RS13175 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I8ZZ33

Nearby Genes

500 ntHMPREF1058_RS0119525 and HMPREF1058_RS20235 are separated by 28 nucleotidesHMPREF1058_RS20235 and HMPREF1058_RS13190 are separated by 20 nucleotidesHMPREF1058_RS13190 and HMPREF1058_RS13185 are separated by 25 nucleotidesHMPREF1058_RS13185 and HMPREF1058_RS13180 are separated by 45 nucleotidesHMPREF1058_RS13180 and HMPREF1058_RS13175 are separated by 19 nucleotidesHMPREF1058_RS13175 and HMPREF1058_RS13170 are separated by 28 nucleotidesHMPREF1058_RS13170 and HMPREF1058_RS13165 are separated by 12 nucleotidesHMPREF1058_RS13165 and HMPREF1058_RS13160 are separated by 136 nucleotidesHMPREF1058_RS13160 and HMPREF1058_RS13155 are separated by 267 nucleotidesHMPREF1058_RS13155 and HMPREF1058_RS13150 are separated by 735 nucleotides HMPREF1058_RS0119525: HMPREF1058_RS0119525 - DUF4971 domain-containing protein, at 1,561,586 to 1,562,650 _RS0119525 HMPREF1058_RS20235: HMPREF1058_RS20235 - DUF4971 domain-containing protein, at 1,562,679 to 1,563,791 _RS20235 HMPREF1058_RS13190: HMPREF1058_RS13190 - hypothetical protein, at 1,563,812 to 1,565,275 _RS13190 HMPREF1058_RS13185: HMPREF1058_RS13185 - BACON domain-containing protein, at 1,565,301 to 1,566,779 _RS13185 HMPREF1058_RS13180: HMPREF1058_RS13180 - RagB/SusD family nutrient uptake outer membrane protein, at 1,566,825 to 1,568,507 _RS13180 HMPREF1058_RS13175: HMPREF1058_RS13175 - SusC/RagA family TonB-linked outer membrane protein, at 1,568,527 to 1,571,295 _RS13175 HMPREF1058_RS13170: HMPREF1058_RS13170 - RagB/SusD family nutrient uptake outer membrane protein, at 1,571,324 to 1,573,090 _RS13170 HMPREF1058_RS13165: HMPREF1058_RS13165 - TonB-dependent receptor, at 1,573,103 to 1,576,267 _RS13165 HMPREF1058_RS13160: HMPREF1058_RS13160 - response regulator, at 1,576,404 to 1,580,384 _RS13160 HMPREF1058_RS13155: HMPREF1058_RS13155 - IS982 family transposase, at 1,580,652 to 1,581,557 _RS13155 HMPREF1058_RS13150: HMPREF1058_RS13150 - YjbH domain-containing protein, at 1,582,293 to 1,583,174 _RS13150
Locus Name Description Strand Phenotype
HMPREF1058_RS0119525 HMPREF1058_RS0119525 DUF4971 domain-containing protein - insig.
HMPREF1058_RS20235 HMPREF1058_RS20235 DUF4971 domain-containing protein - insig.
HMPREF1058_RS13190 HMPREF1058_RS13190 hypothetical protein - insig.
HMPREF1058_RS13185 HMPREF1058_RS13185 BACON domain-containing protein - insig.
HMPREF1058_RS13180 HMPREF1058_RS13180 RagB/SusD family nutrient uptake outer membrane protein - cofit
HMPREF1058_RS13175 HMPREF1058_RS13175 SusC/RagA family TonB-linked outer membrane protein - insig.
HMPREF1058_RS13170 HMPREF1058_RS13170 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS13165 HMPREF1058_RS13165 TonB-dependent receptor - cofit
HMPREF1058_RS13160 HMPREF1058_RS13160 response regulator - cofit
HMPREF1058_RS13155 HMPREF1058_RS13155 IS982 family transposase + insig.
HMPREF1058_RS13150 HMPREF1058_RS13150 YjbH domain-containing protein - insig.

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