Gene info for HMPREF1058_RS13035 in Phocaeicola vulgatus CL09T03C04

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,607,825 to 1,609,837
See nucleotide sequence around HMPREF1058_RS13035 or for all of scaffold NZ_JH724282

Other databases: NCBI, uniprot: I8ZZA9

Nearby Genes

500 ntHMPREF1058_RS13060 and HMPREF1058_RS13055 are separated by 685 nucleotidesHMPREF1058_RS13055 and HMPREF1058_RS13050 are separated by 5 nucleotidesHMPREF1058_RS13050 and HMPREF1058_RS13045 overlap by 4 nucleotidesHMPREF1058_RS13045 and HMPREF1058_RS13040 are separated by 436 nucleotidesHMPREF1058_RS13040 and HMPREF1058_RS13035 are separated by 1039 nucleotidesHMPREF1058_RS13035 and HMPREF1058_RS13030 are separated by 10 nucleotidesHMPREF1058_RS13030 and HMPREF1058_RS21605 are separated by 937 nucleotidesHMPREF1058_RS21605 and HMPREF1058_RS13025 are separated by 568 nucleotidesHMPREF1058_RS13025 and HMPREF1058_RS13020 are separated by 1163 nucleotidesHMPREF1058_RS13020 and HMPREF1058_RS13015 are separated by 5 nucleotides HMPREF1058_RS13060: HMPREF1058_RS13060 - helix-turn-helix transcriptional regulator, at 1,603,417 to 1,603,887 _RS13060 HMPREF1058_RS13055: HMPREF1058_RS13055 - hypothetical protein, at 1,604,573 to 1,605,289 _RS13055 HMPREF1058_RS13050: HMPREF1058_RS13050 - hypothetical protein, at 1,605,295 to 1,605,729 _RS13050 HMPREF1058_RS13045: HMPREF1058_RS13045 - hypothetical protein, at 1,605,726 to 1,606,064 _RS13045 HMPREF1058_RS13040: HMPREF1058_RS13040 - winged helix-turn-helix domain-containing protein, at 1,606,501 to 1,606,785 _RS13040 HMPREF1058_RS13035: HMPREF1058_RS13035 - RagB/SusD family nutrient uptake outer membrane protein, at 1,607,825 to 1,609,837 _RS13035 HMPREF1058_RS13030: HMPREF1058_RS13030 - TonB-dependent receptor, at 1,609,848 to 1,613,072 _RS13030 HMPREF1058_RS21605: HMPREF1058_RS21605 - hypothetical protein, at 1,614,010 to 1,614,174 _RS21605 HMPREF1058_RS13025: HMPREF1058_RS13025 - hypothetical protein, at 1,614,743 to 1,615,894 _RS13025 HMPREF1058_RS13020: HMPREF1058_RS13020 - hypothetical protein, at 1,617,058 to 1,617,264 _RS13020 HMPREF1058_RS13015: HMPREF1058_RS13015 - recombinase family protein, at 1,617,270 to 1,617,953 _RS13015
Locus Name Description Strand Phenotype
HMPREF1058_RS13060 HMPREF1058_RS13060 helix-turn-helix transcriptional regulator - cofit
HMPREF1058_RS13055 HMPREF1058_RS13055 hypothetical protein - insig.
HMPREF1058_RS13050 HMPREF1058_RS13050 hypothetical protein - insig.
HMPREF1058_RS13045 HMPREF1058_RS13045 hypothetical protein - sig.
HMPREF1058_RS13040 HMPREF1058_RS13040 winged helix-turn-helix domain-containing protein + insig.
HMPREF1058_RS13035 HMPREF1058_RS13035 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS13030 HMPREF1058_RS13030 TonB-dependent receptor - cofit
HMPREF1058_RS21605 HMPREF1058_RS21605 hypothetical protein - insig.
HMPREF1058_RS13025 HMPREF1058_RS13025 hypothetical protein - insig.
HMPREF1058_RS13020 HMPREF1058_RS13020 hypothetical protein - insig.
HMPREF1058_RS13015 HMPREF1058_RS13015 recombinase family protein - insig.

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