Gene info for HMPREF1058_RS12800 in Phocaeicola vulgatus CL09T03C04

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 27,779 to 30,253
See nucleotide sequence around HMPREF1058_RS12800 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9UEC9

Nearby Genes

500 ntHMPREF1058_RS12825 and HMPREF1058_RS12820 overlap by 4 nucleotidesHMPREF1058_RS12820 and HMPREF1058_RS12815 are separated by 7 nucleotidesHMPREF1058_RS12815 and HMPREF1058_RS12810 are separated by 95 nucleotidesHMPREF1058_RS12810 and HMPREF1058_RS12805 are separated by 80 nucleotidesHMPREF1058_RS12805 and HMPREF1058_RS12800 are separated by 168 nucleotidesHMPREF1058_RS12800 and HMPREF1058_RS12795 are separated by 89 nucleotidesHMPREF1058_RS12795 and HMPREF1058_RS12790 are separated by 294 nucleotidesHMPREF1058_RS12790 and HMPREF1058_RS12785 are separated by 57 nucleotidesHMPREF1058_RS12785 and HMPREF1058_RS12780 are separated by 213 nucleotidesHMPREF1058_RS12780 and HMPREF1058_RS12775 are separated by 5 nucleotides HMPREF1058_RS12825: HMPREF1058_RS12825 - alkaline phosphatase, at 22,855 to 24,273 _RS12825 HMPREF1058_RS12820: HMPREF1058_RS12820 - helix-hairpin-helix domain-containing protein, at 24,270 to 25,172 _RS12820 HMPREF1058_RS12815: HMPREF1058_RS12815 - sodium-dependent transporter, at 25,180 to 26,544 _RS12815 HMPREF1058_RS12810: HMPREF1058_RS12810 - VanZ family protein, at 26,640 to 27,026 _RS12810 HMPREF1058_RS12805: HMPREF1058_RS12805 - RNA polymerase sigma factor, at 27,107 to 27,610 _RS12805 HMPREF1058_RS12800: HMPREF1058_RS12800 - TonB-dependent receptor, at 27,779 to 30,253 _RS12800 HMPREF1058_RS12795: HMPREF1058_RS12795 - CYTH domain-containing protein, at 30,343 to 30,813 _RS12795 HMPREF1058_RS12790: HMPREF1058_RS12790 - peptide chain release factor 2, at 31,108 to 32,223 _RS12790 HMPREF1058_RS12785: HMPREF1058_RS12785 - long-chain fatty acid--CoA ligase, at 32,281 to 34,086 _RS12785 HMPREF1058_RS12780: HMPREF1058_RS12780 - M20 family metallo-hydrolase, at 34,300 to 35,364 _RS12780 HMPREF1058_RS12775: HMPREF1058_RS12775 - hypothetical protein, at 35,370 to 35,699 _RS12775
Locus Name Description Strand Phenotype
HMPREF1058_RS12825 HMPREF1058_RS12825 alkaline phosphatase + strong
HMPREF1058_RS12820 HMPREF1058_RS12820 helix-hairpin-helix domain-containing protein - insig.
HMPREF1058_RS12815 HMPREF1058_RS12815 sodium-dependent transporter - strong
HMPREF1058_RS12810 HMPREF1058_RS12810 VanZ family protein + strong
HMPREF1058_RS12805 HMPREF1058_RS12805 RNA polymerase sigma factor - strong
HMPREF1058_RS12800 HMPREF1058_RS12800 TonB-dependent receptor - cofit
HMPREF1058_RS12795 HMPREF1058_RS12795 CYTH domain-containing protein - strong
HMPREF1058_RS12790 HMPREF1058_RS12790 peptide chain release factor 2 - no data
HMPREF1058_RS12785 HMPREF1058_RS12785 long-chain fatty acid--CoA ligase - strong
HMPREF1058_RS12780 HMPREF1058_RS12780 M20 family metallo-hydrolase + strong
HMPREF1058_RS12775 HMPREF1058_RS12775 hypothetical protein - insig.

Or browse nearby genes

Or see the comparative fitness browser