Gene info for HMPREF1058_RS12015 in Phocaeicola vulgatus CL09T03C04

Annotation: outer membrane beta-barrel protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 225,534 to 227,606
See nucleotide sequence around HMPREF1058_RS12015 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9UD01

Nearby Genes

500 ntHMPREF1058_RS12040 and HMPREF1058_RS12035 are separated by 98 nucleotidesHMPREF1058_RS12035 and HMPREF1058_RS12030 are separated by 82 nucleotidesHMPREF1058_RS12030 and HMPREF1058_RS12025 are separated by 68 nucleotidesHMPREF1058_RS12025 and HMPREF1058_RS12020 are separated by 11 nucleotidesHMPREF1058_RS12020 and HMPREF1058_RS12015 are separated by 35 nucleotidesHMPREF1058_RS12015 and HMPREF1058_RS12010 are separated by 51 nucleotidesHMPREF1058_RS12010 and HMPREF1058_RS12005 are separated by 4 nucleotidesHMPREF1058_RS12005 and HMPREF1058_RS12000 overlap by 4 nucleotidesHMPREF1058_RS12000 and HMPREF1058_RS11995 are separated by 3 nucleotidesHMPREF1058_RS11995 and HMPREF1058_RS11990 are separated by 23 nucleotides HMPREF1058_RS12040: HMPREF1058_RS12040 - butyrate kinase, at 220,074 to 221,138 _RS12040 HMPREF1058_RS12035: HMPREF1058_RS12035 - phosphate butyryltransferase, at 221,237 to 222,145 _RS12035 HMPREF1058_RS12030: HMPREF1058_RS12030 - gamma-glutamyl-gamma-aminobutyrate hydrolase family protein, at 222,228 to 223,985 _RS12030 HMPREF1058_RS12025: HMPREF1058_RS12025 - M28 family peptidase, at 224,054 to 225,058 _RS12025 HMPREF1058_RS12020: HMPREF1058_RS12020 - SufE family protein, at 225,070 to 225,498 _RS12020 HMPREF1058_RS12015: HMPREF1058_RS12015 - outer membrane beta-barrel protein, at 225,534 to 227,606 _RS12015 HMPREF1058_RS12010: HMPREF1058_RS12010 - HAMP domain-containing histidine kinase, at 227,658 to 229,196 _RS12010 HMPREF1058_RS12005: HMPREF1058_RS12005 - response regulator transcription factor, at 229,201 to 229,884 _RS12005 HMPREF1058_RS12000: HMPREF1058_RS12000 - hypothetical protein, at 229,881 to 231,065 _RS12000 HMPREF1058_RS11995: HMPREF1058_RS11995 - M15 family metallopeptidase, at 231,069 to 231,734 _RS11995 HMPREF1058_RS11990: HMPREF1058_RS11990 - MarR family transcriptional regulator, at 231,758 to 232,105 _RS11990
Locus Name Description Strand Phenotype
HMPREF1058_RS12040 HMPREF1058_RS12040 butyrate kinase - strong
HMPREF1058_RS12035 HMPREF1058_RS12035 phosphate butyryltransferase - strong
HMPREF1058_RS12030 HMPREF1058_RS12030 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein + insig.
HMPREF1058_RS12025 HMPREF1058_RS12025 M28 family peptidase + no data
HMPREF1058_RS12020 HMPREF1058_RS12020 SufE family protein + no data
HMPREF1058_RS12015 HMPREF1058_RS12015 outer membrane beta-barrel protein - insig.
HMPREF1058_RS12010 HMPREF1058_RS12010 HAMP domain-containing histidine kinase + insig.
HMPREF1058_RS12005 HMPREF1058_RS12005 response regulator transcription factor + insig.
HMPREF1058_RS12000 HMPREF1058_RS12000 hypothetical protein - sig.
HMPREF1058_RS11995 HMPREF1058_RS11995 M15 family metallopeptidase - insig.
HMPREF1058_RS11990 HMPREF1058_RS11990 MarR family transcriptional regulator - insig.

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