Gene info for HMPREF1058_RS11915 in Phocaeicola vulgatus CL09T03C04

Annotation: helix-turn-helix transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, + strand, nucleotides 244,737 to 244,949
See nucleotide sequence around HMPREF1058_RS11915 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I8ZWX0

Nearby Genes

500 ntHMPREF1058_RS11940 and HMPREF1058_RS11935 overlap by 1 nucleotidesHMPREF1058_RS11935 and HMPREF1058_RS11930 are separated by 172 nucleotidesHMPREF1058_RS11930 and HMPREF1058_RS11925 are separated by 8 nucleotidesHMPREF1058_RS11925 and HMPREF1058_RS11920 are separated by 16 nucleotidesHMPREF1058_RS11920 and HMPREF1058_RS11915 are separated by 271 nucleotidesHMPREF1058_RS11915 and HMPREF1058_RS11910 are separated by 261 nucleotidesHMPREF1058_RS11910 and HMPREF1058_RS11905 are separated by 320 nucleotidesHMPREF1058_RS11905 and HMPREF1058_RS11900 are separated by 4 nucleotidesHMPREF1058_RS11900 and HMPREF1058_RS11895 are separated by 2 nucleotidesHMPREF1058_RS11895 and HMPREF1058_RS11890 are separated by 3 nucleotides HMPREF1058_RS11940: HMPREF1058_RS11940 - DUF3836 domain-containing protein, at 241,439 to 241,861 _RS11940 HMPREF1058_RS11935: HMPREF1058_RS11935 - hypothetical protein, at 241,861 to 242,160 _RS11935 HMPREF1058_RS11930: HMPREF1058_RS11930 - CPBP family intramembrane metalloprotease, at 242,333 to 243,163 _RS11930 HMPREF1058_RS11925: HMPREF1058_RS11925 - DUF2975 domain-containing protein, at 243,172 to 243,801 _RS11925 HMPREF1058_RS11920: HMPREF1058_RS11920 - DUF2975 domain-containing protein, at 243,818 to 244,465 _RS11920 HMPREF1058_RS11915: HMPREF1058_RS11915 - helix-turn-helix transcriptional regulator, at 244,737 to 244,949 _RS11915 HMPREF1058_RS11910: HMPREF1058_RS11910 - DEAD/DEAH box helicase, at 245,211 to 247,085 _RS11910 HMPREF1058_RS11905: HMPREF1058_RS11905 - S46 family peptidase, at 247,406 to 249,532 _RS11905 HMPREF1058_RS11900: HMPREF1058_RS11900 - TIGR00341 family protein, at 249,537 to 250,901 _RS11900 HMPREF1058_RS11895: HMPREF1058_RS11895 - lipopolysaccharide biosynthesis protein, at 250,904 to 252,349 _RS11895 HMPREF1058_RS11890: HMPREF1058_RS11890 - Holliday junction branch migration DNA helicase RuvB, at 252,353 to 253,381 _RS11890
Locus Name Description Strand Phenotype
HMPREF1058_RS11940 HMPREF1058_RS11940 DUF3836 domain-containing protein + strong
HMPREF1058_RS11935 HMPREF1058_RS11935 hypothetical protein + sig.
HMPREF1058_RS11930 HMPREF1058_RS11930 CPBP family intramembrane metalloprotease + strong
HMPREF1058_RS11925 HMPREF1058_RS11925 DUF2975 domain-containing protein + insig.
HMPREF1058_RS11920 HMPREF1058_RS11920 DUF2975 domain-containing protein + strong
HMPREF1058_RS11915 HMPREF1058_RS11915 helix-turn-helix transcriptional regulator + cofit
HMPREF1058_RS11910 HMPREF1058_RS11910 DEAD/DEAH box helicase + strong
HMPREF1058_RS11905 HMPREF1058_RS11905 S46 family peptidase - insig.
HMPREF1058_RS11900 HMPREF1058_RS11900 TIGR00341 family protein - insig.
HMPREF1058_RS11895 HMPREF1058_RS11895 lipopolysaccharide biosynthesis protein - no data
HMPREF1058_RS11890 HMPREF1058_RS11890 Holliday junction branch migration DNA helicase RuvB - strong

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