Gene info for HMPREF1058_RS11025 in Phocaeicola vulgatus CL09T03C04

Annotation: zinc ABC transporter substrate-binding protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 498,539 to 499,444
See nucleotide sequence around HMPREF1058_RS11025 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I8ZVX0

Nearby Genes

500 ntHMPREF1058_RS11050 and HMPREF1058_RS11045 are separated by 96 nucleotidesHMPREF1058_RS11045 and HMPREF1058_RS11040 are separated by 63 nucleotidesHMPREF1058_RS11040 and HMPREF1058_RS11035 are separated by 70 nucleotidesHMPREF1058_RS11035 and HMPREF1058_RS11030 are separated by 460 nucleotidesHMPREF1058_RS11030 and HMPREF1058_RS11025 are separated by 9 nucleotidesHMPREF1058_RS11025 and HMPREF1058_RS11020 are separated by 673 nucleotidesHMPREF1058_RS11020 and HMPREF1058_RS11015 are separated by 57 nucleotidesHMPREF1058_RS11015 and HMPREF1058_RS11010 are separated by 352 nucleotidesHMPREF1058_RS11010 and HMPREF1058_RS11005 are separated by 4 nucleotidesHMPREF1058_RS11005 and HMPREF1058_RS11000 overlap by 25 nucleotides HMPREF1058_RS11050: HMPREF1058_RS11050 - gluconate 5-dehydrogenase, at 491,079 to 491,882 _RS11050 HMPREF1058_RS11045: HMPREF1058_RS11045 - DUF4861 domain-containing protein, at 491,979 to 493,151 _RS11045 HMPREF1058_RS11040: HMPREF1058_RS11040 - polysaccharide deacetylase family protein, at 493,215 to 493,826 _RS11040 HMPREF1058_RS11035: HMPREF1058_RS11035 - DUF2723 domain-containing protein, at 493,897 to 497,301 _RS11035 HMPREF1058_RS11030: HMPREF1058_RS11030 - metal ABC transporter ATP-binding protein, at 497,762 to 498,529 _RS11030 HMPREF1058_RS11025: HMPREF1058_RS11025 - zinc ABC transporter substrate-binding protein, at 498,539 to 499,444 _RS11025 HMPREF1058_RS11020: HMPREF1058_RS11020 - helix-turn-helix domain-containing protein, at 500,118 to 500,615 _RS11020 HMPREF1058_RS11015: HMPREF1058_RS11015 - hypothetical protein, at 500,673 to 503,672 _RS11015 HMPREF1058_RS11010: HMPREF1058_RS11010 - tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD, at 504,025 to 504,708 _RS11010 HMPREF1058_RS11005: HMPREF1058_RS11005 - DedA family protein, at 504,713 to 505,180 _RS11005 HMPREF1058_RS11000: HMPREF1058_RS11000 - hypothetical protein, at 505,156 to 506,091 _RS11000
Locus Name Description Strand Phenotype
HMPREF1058_RS11050 HMPREF1058_RS11050 gluconate 5-dehydrogenase + cofit
HMPREF1058_RS11045 HMPREF1058_RS11045 DUF4861 domain-containing protein + insig.
HMPREF1058_RS11040 HMPREF1058_RS11040 polysaccharide deacetylase family protein - strong
HMPREF1058_RS11035 HMPREF1058_RS11035 DUF2723 domain-containing protein - no data
HMPREF1058_RS11030 HMPREF1058_RS11030 metal ABC transporter ATP-binding protein - insig.
HMPREF1058_RS11025 HMPREF1058_RS11025 zinc ABC transporter substrate-binding protein - insig.
HMPREF1058_RS11020 HMPREF1058_RS11020 helix-turn-helix domain-containing protein + insig.
HMPREF1058_RS11015 HMPREF1058_RS11015 hypothetical protein + cofit
HMPREF1058_RS11010 HMPREF1058_RS11010 tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD - insig.
HMPREF1058_RS11005 HMPREF1058_RS11005 DedA family protein - sig.
HMPREF1058_RS11000 HMPREF1058_RS11000 hypothetical protein - sig.

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