Gene info for HMPREF1058_RS11010 in Phocaeicola vulgatus CL09T03C04

Annotation: tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 504,025 to 504,708
See nucleotide sequence around HMPREF1058_RS11010 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9J0A7

Nearby Genes

500 ntHMPREF1058_RS11035 and HMPREF1058_RS11030 are separated by 460 nucleotidesHMPREF1058_RS11030 and HMPREF1058_RS11025 are separated by 9 nucleotidesHMPREF1058_RS11025 and HMPREF1058_RS11020 are separated by 673 nucleotidesHMPREF1058_RS11020 and HMPREF1058_RS11015 are separated by 57 nucleotidesHMPREF1058_RS11015 and HMPREF1058_RS11010 are separated by 352 nucleotidesHMPREF1058_RS11010 and HMPREF1058_RS11005 are separated by 4 nucleotidesHMPREF1058_RS11005 and HMPREF1058_RS11000 overlap by 25 nucleotidesHMPREF1058_RS11000 and HMPREF1058_RS10995 are separated by 18 nucleotidesHMPREF1058_RS10995 and HMPREF1058_RS10990 are separated by 15 nucleotidesHMPREF1058_RS10990 and HMPREF1058_RS10985 are separated by 6 nucleotides HMPREF1058_RS11035: HMPREF1058_RS11035 - DUF2723 domain-containing protein, at 493,897 to 497,301 _RS11035 HMPREF1058_RS11030: HMPREF1058_RS11030 - metal ABC transporter ATP-binding protein, at 497,762 to 498,529 _RS11030 HMPREF1058_RS11025: HMPREF1058_RS11025 - zinc ABC transporter substrate-binding protein, at 498,539 to 499,444 _RS11025 HMPREF1058_RS11020: HMPREF1058_RS11020 - helix-turn-helix domain-containing protein, at 500,118 to 500,615 _RS11020 HMPREF1058_RS11015: HMPREF1058_RS11015 - hypothetical protein, at 500,673 to 503,672 _RS11015 HMPREF1058_RS11010: HMPREF1058_RS11010 - tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD, at 504,025 to 504,708 _RS11010 HMPREF1058_RS11005: HMPREF1058_RS11005 - DedA family protein, at 504,713 to 505,180 _RS11005 HMPREF1058_RS11000: HMPREF1058_RS11000 - hypothetical protein, at 505,156 to 506,091 _RS11000 HMPREF1058_RS10995: HMPREF1058_RS10995 - phosphoribosylamine--glycine ligase, at 506,110 to 507,378 _RS10995 HMPREF1058_RS10990: HMPREF1058_RS10990 - S9 family peptidase, at 507,394 to 509,607 _RS10990 HMPREF1058_RS10985: HMPREF1058_RS10985 - RNA methyltransferase, at 509,614 to 511,062 _RS10985
Locus Name Description Strand Phenotype
HMPREF1058_RS11035 HMPREF1058_RS11035 DUF2723 domain-containing protein - no data
HMPREF1058_RS11030 HMPREF1058_RS11030 metal ABC transporter ATP-binding protein - insig.
HMPREF1058_RS11025 HMPREF1058_RS11025 zinc ABC transporter substrate-binding protein - insig.
HMPREF1058_RS11020 HMPREF1058_RS11020 helix-turn-helix domain-containing protein + insig.
HMPREF1058_RS11015 HMPREF1058_RS11015 hypothetical protein + cofit
HMPREF1058_RS11010 HMPREF1058_RS11010 tRNA (5-methylaminomethyl-2-thiouridine)(34)-methyltransferase MnmD - insig.
HMPREF1058_RS11005 HMPREF1058_RS11005 DedA family protein - sig.
HMPREF1058_RS11000 HMPREF1058_RS11000 hypothetical protein - sig.
HMPREF1058_RS10995 HMPREF1058_RS10995 phosphoribosylamine--glycine ligase - strong
HMPREF1058_RS10990 HMPREF1058_RS10990 S9 family peptidase - sig.
HMPREF1058_RS10985 HMPREF1058_RS10985 RNA methyltransferase - strong

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