Gene info for HMPREF1058_RS10740 in Phocaeicola vulgatus CL09T03C04

Annotation: RagB/SusD family nutrient uptake outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 576,204 to 578,117
See nucleotide sequence around HMPREF1058_RS10740 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9J0I8

Nearby Genes

500 ntHMPREF1058_RS10765 and HMPREF1058_RS10760 are separated by 144 nucleotidesHMPREF1058_RS10760 and HMPREF1058_RS10755 are separated by 18 nucleotidesHMPREF1058_RS10755 and HMPREF1058_RS10750 are separated by 6 nucleotidesHMPREF1058_RS10750 and HMPREF1058_RS10745 are separated by 3 nucleotidesHMPREF1058_RS10745 and HMPREF1058_RS10740 are separated by 101 nucleotidesHMPREF1058_RS10740 and HMPREF1058_RS10735 are separated by 20 nucleotidesHMPREF1058_RS10735 and HMPREF1058_RS10730 are separated by 184 nucleotidesHMPREF1058_RS10730 and HMPREF1058_RS10725 are separated by 9 nucleotidesHMPREF1058_RS10725 and HMPREF1058_RS10720 are separated by 147 nucleotidesHMPREF1058_RS10720 and HMPREF1058_RS10715 are separated by 4 nucleotides HMPREF1058_RS10765: HMPREF1058_RS10765 - ribonuclease III, at 568,552 to 569,478 _RS10765 HMPREF1058_RS10760: HMPREF1058_RS10760 - sulfatase, at 569,623 to 571,176 _RS10760 HMPREF1058_RS10755: HMPREF1058_RS10755 - alpha-galactosidase, at 571,195 to 573,270 _RS10755 HMPREF1058_RS10750: HMPREF1058_RS10750 - alpha-L-fucosidase, at 573,277 to 574,662 _RS10750 HMPREF1058_RS10745: HMPREF1058_RS10745 - sulfatase, at 574,666 to 576,102 _RS10745 HMPREF1058_RS10740: HMPREF1058_RS10740 - RagB/SusD family nutrient uptake outer membrane protein, at 576,204 to 578,117 _RS10740 HMPREF1058_RS10735: HMPREF1058_RS10735 - TonB-dependent receptor, at 578,138 to 581,392 _RS10735 HMPREF1058_RS10730: HMPREF1058_RS10730 - response regulator, at 581,577 to 585,650 _RS10730 HMPREF1058_RS10725: HMPREF1058_RS10725 - 6-phosphofructokinase, at 585,660 to 586,670 _RS10725 HMPREF1058_RS10720: HMPREF1058_RS10720 - GH3 auxin-responsive promoter family protein, at 586,818 to 588,323 _RS10720 HMPREF1058_RS10715: HMPREF1058_RS10715 - Ig-like domain-containing protein, at 588,328 to 590,250 _RS10715
Locus Name Description Strand Phenotype
HMPREF1058_RS10765 HMPREF1058_RS10765 ribonuclease III + strong
HMPREF1058_RS10760 HMPREF1058_RS10760 sulfatase - strong
HMPREF1058_RS10755 HMPREF1058_RS10755 alpha-galactosidase - cofit
HMPREF1058_RS10750 HMPREF1058_RS10750 alpha-L-fucosidase - insig.
HMPREF1058_RS10745 HMPREF1058_RS10745 sulfatase - insig.
HMPREF1058_RS10740 HMPREF1058_RS10740 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS10735 HMPREF1058_RS10735 TonB-dependent receptor - insig.
HMPREF1058_RS10730 HMPREF1058_RS10730 response regulator + insig.
HMPREF1058_RS10725 HMPREF1058_RS10725 6-phosphofructokinase - strong
HMPREF1058_RS10720 HMPREF1058_RS10720 GH3 auxin-responsive promoter family protein + strong
HMPREF1058_RS10715 HMPREF1058_RS10715 Ig-like domain-containing protein + no data

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