Gene info for HMPREF1058_RS09705 in Phocaeicola vulgatus CL09T03C04

Annotation: lipopolysaccharide biosynthesis protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 814,365 to 815,801
See nucleotide sequence around HMPREF1058_RS09705 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9U8F0

Nearby Genes

500 ntHMPREF1058_RS09730 and HMPREF1058_RS09725 are separated by 3 nucleotidesHMPREF1058_RS09725 and HMPREF1058_RS09720 overlap by 4 nucleotidesHMPREF1058_RS09720 and HMPREF1058_RS09715 are separated by 90 nucleotidesHMPREF1058_RS09715 and HMPREF1058_RS09710 are separated by 22 nucleotidesHMPREF1058_RS09710 and HMPREF1058_RS09705 overlap by 1 nucleotidesHMPREF1058_RS09705 and HMPREF1058_RS09700 are separated by 81 nucleotidesHMPREF1058_RS09700 and HMPREF1058_RS21625 are separated by 286 nucleotidesHMPREF1058_RS21625 and HMPREF1058_RS09695 are separated by 1 nucleotidesHMPREF1058_RS09695 and HMPREF1058_RS09690 are separated by 4 nucleotidesHMPREF1058_RS09690 and HMPREF1058_RS09685 are separated by 153 nucleotides HMPREF1058_RS09730: HMPREF1058_RS09730 - LicD family protein, at 808,693 to 809,490 _RS09730 HMPREF1058_RS09725: HMPREF1058_RS09725 - NAD/NADP octopine/nopaline dehydrogenase family protein, at 809,494 to 810,594 _RS09725 HMPREF1058_RS09720: HMPREF1058_RS09720 - aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme, at 810,591 to 812,396 _RS09720 HMPREF1058_RS09715: HMPREF1058_RS09715 - hypothetical protein, at 812,487 to 813,317 _RS09715 HMPREF1058_RS09710: HMPREF1058_RS09710 - acyltransferase, at 813,340 to 814,365 _RS09710 HMPREF1058_RS09705: HMPREF1058_RS09705 - lipopolysaccharide biosynthesis protein, at 814,365 to 815,801 _RS09705 HMPREF1058_RS09700: HMPREF1058_RS09700 - methionine--tRNA ligase, at 815,883 to 817,925 _RS09700 HMPREF1058_RS21625: HMPREF1058_RS21625 - hypothetical protein, at 818,212 to 818,379 _RS21625 HMPREF1058_RS09695: HMPREF1058_RS09695 - YifB family Mg chelatase-like AAA ATPase, at 818,381 to 819,919 _RS09695 HMPREF1058_RS09690: HMPREF1058_RS09690 - DUF4369 domain-containing protein, at 819,924 to 820,991 _RS09690 HMPREF1058_RS09685: HMPREF1058_RS09685 - tetratricopeptide repeat protein, at 821,145 to 822,821 _RS09685
Locus Name Description Strand Phenotype
HMPREF1058_RS09730 HMPREF1058_RS09730 LicD family protein - strong
HMPREF1058_RS09725 HMPREF1058_RS09725 NAD/NADP octopine/nopaline dehydrogenase family protein - strong
HMPREF1058_RS09720 HMPREF1058_RS09720 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme - strong
HMPREF1058_RS09715 HMPREF1058_RS09715 hypothetical protein + strong
HMPREF1058_RS09710 HMPREF1058_RS09710 acyltransferase - sig.
HMPREF1058_RS09705 HMPREF1058_RS09705 lipopolysaccharide biosynthesis protein - no data
HMPREF1058_RS09700 HMPREF1058_RS09700 methionine--tRNA ligase - strong
HMPREF1058_RS21625 HMPREF1058_RS21625 hypothetical protein + insig.
HMPREF1058_RS09695 HMPREF1058_RS09695 YifB family Mg chelatase-like AAA ATPase - insig.
HMPREF1058_RS09690 HMPREF1058_RS09690 DUF4369 domain-containing protein - strong
HMPREF1058_RS09685 HMPREF1058_RS09685 tetratricopeptide repeat protein - strong

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