Gene info for HMPREF1058_RS09485 in Phocaeicola vulgatus CL09T03C04

Annotation: PDZ domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, + strand, nucleotides 871,267 to 872,961
See nucleotide sequence around HMPREF1058_RS09485 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I8ZST8

Nearby Genes

500 ntHMPREF1058_RS09510 and HMPREF1058_RS09505 are separated by 22 nucleotidesHMPREF1058_RS09505 and HMPREF1058_RS09500 are separated by 213 nucleotidesHMPREF1058_RS09500 and HMPREF1058_RS09495 are separated by 355 nucleotidesHMPREF1058_RS09495 and HMPREF1058_RS09490 are separated by 80 nucleotidesHMPREF1058_RS09490 and HMPREF1058_RS09485 are separated by 43 nucleotidesHMPREF1058_RS09485 and HMPREF1058_RS09480 are separated by 65 nucleotidesHMPREF1058_RS09480 and HMPREF1058_RS09475 are separated by 121 nucleotidesHMPREF1058_RS09475 and HMPREF1058_RS09470 are separated by 24 nucleotidesHMPREF1058_RS09470 and HMPREF1058_RS20760 are separated by 50 nucleotidesHMPREF1058_RS20760 and HMPREF1058_RS09465 are separated by 113 nucleotides HMPREF1058_RS09510: HMPREF1058_RS09510 - TonB-dependent receptor, at 860,913 to 863,951 _RS09510 HMPREF1058_RS09505: HMPREF1058_RS09505 - hypothetical protein, at 863,974 to 865,473 _RS09505 HMPREF1058_RS09500: HMPREF1058_RS09500 - response regulator, at 865,687 to 869,727 _RS09500 HMPREF1058_RS09495: HMPREF1058_RS09495 - tRNA-Asn, at 870,083 to 870,156 _RS09495 HMPREF1058_RS09490: HMPREF1058_RS09490 - adenosine kinase, at 870,237 to 871,223 _RS09490 HMPREF1058_RS09485: HMPREF1058_RS09485 - PDZ domain-containing protein, at 871,267 to 872,961 _RS09485 HMPREF1058_RS09480: HMPREF1058_RS09480 - outer membrane beta-barrel protein, at 873,027 to 875,324 _RS09480 HMPREF1058_RS09475: HMPREF1058_RS09475 - HAMP domain-containing histidine kinase, at 875,446 to 876,831 _RS09475 HMPREF1058_RS09470: HMPREF1058_RS09470 - response regulator transcription factor, at 876,856 to 877,557 _RS09470 HMPREF1058_RS20760: HMPREF1058_RS20760 - GNAT family N-acetyltransferase, at 877,608 to 878,564 _RS20760 HMPREF1058_RS09465: HMPREF1058_RS09465 - porin family protein, at 878,678 to 879,169 _RS09465
Locus Name Description Strand Phenotype
HMPREF1058_RS09510 HMPREF1058_RS09510 TonB-dependent receptor - insig.
HMPREF1058_RS09505 HMPREF1058_RS09505 hypothetical protein - insig.
HMPREF1058_RS09500 HMPREF1058_RS09500 response regulator + insig.
HMPREF1058_RS09495 HMPREF1058_RS09495 tRNA-Asn - no data
HMPREF1058_RS09490 HMPREF1058_RS09490 adenosine kinase + sig.
HMPREF1058_RS09485 HMPREF1058_RS09485 PDZ domain-containing protein + strong
HMPREF1058_RS09480 HMPREF1058_RS09480 outer membrane beta-barrel protein - insig.
HMPREF1058_RS09475 HMPREF1058_RS09475 HAMP domain-containing histidine kinase + insig.
HMPREF1058_RS09470 HMPREF1058_RS09470 response regulator transcription factor + cofit
HMPREF1058_RS20760 HMPREF1058_RS20760 GNAT family N-acetyltransferase - insig.
HMPREF1058_RS09465 HMPREF1058_RS09465 porin family protein - insig.

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