Gene info for HMPREF1058_RS08935 in Phocaeicola vulgatus CL09T03C04

Annotation: outer membrane beta-barrel protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, - strand, nucleotides 986,942 to 989,509
See nucleotide sequence around HMPREF1058_RS08935 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9U8T7

Nearby Genes

500 ntHMPREF1058_RS08960 and HMPREF1058_RS08955 are separated by 32 nucleotidesHMPREF1058_RS08955 and HMPREF1058_RS08950 are separated by 458 nucleotidesHMPREF1058_RS08950 and HMPREF1058_RS08945 are separated by 122 nucleotidesHMPREF1058_RS08945 and HMPREF1058_RS08940 overlap by 4 nucleotidesHMPREF1058_RS08940 and HMPREF1058_RS08935 are separated by 54 nucleotidesHMPREF1058_RS08935 and HMPREF1058_RS08930 are separated by 395 nucleotidesHMPREF1058_RS08930 and HMPREF1058_RS08925 are separated by 115 nucleotidesHMPREF1058_RS08925 and HMPREF1058_RS08920 are separated by 25 nucleotidesHMPREF1058_RS08920 and HMPREF1058_RS08915 are separated by 7 nucleotidesHMPREF1058_RS08915 and HMPREF1058_RS08910 are separated by 148 nucleotides HMPREF1058_RS08960: HMPREF1058_RS08960 - MFS transporter, at 981,198 to 982,496 _RS08960 HMPREF1058_RS08955: HMPREF1058_RS08955 - glycoside hydrolase family 130 protein, at 982,529 to 983,530 _RS08955 HMPREF1058_RS08950: HMPREF1058_RS08950 - Gfo/Idh/MocA family oxidoreductase, at 983,989 to 985,230 _RS08950 HMPREF1058_RS08945: HMPREF1058_RS08945 - FecR domain-containing protein, at 985,353 to 986,363 _RS08945 HMPREF1058_RS08940: HMPREF1058_RS08940 - RNA polymerase sigma-70 factor, at 986,360 to 986,887 _RS08940 HMPREF1058_RS08935: HMPREF1058_RS08935 - outer membrane beta-barrel protein, at 986,942 to 989,509 _RS08935 HMPREF1058_RS08930: HMPREF1058_RS08930 - DUF4981 domain-containing protein, at 989,905 to 993,000 _RS08930 HMPREF1058_RS08925: HMPREF1058_RS08925 - ion transporter, at 993,116 to 993,973 _RS08925 HMPREF1058_RS08920: HMPREF1058_RS08920 - lytic transglycosylase domain-containing protein, at 993,999 to 994,997 _RS08920 HMPREF1058_RS08915: HMPREF1058_RS08915 - AraC family transcriptional regulator, at 995,005 to 995,925 _RS08915 HMPREF1058_RS08910: HMPREF1058_RS08910 - response regulator, at 996,074 to 1,000,234 _RS08910
Locus Name Description Strand Phenotype
HMPREF1058_RS08960 HMPREF1058_RS08960 MFS transporter + insig.
HMPREF1058_RS08955 HMPREF1058_RS08955 glycoside hydrolase family 130 protein + cofit
HMPREF1058_RS08950 HMPREF1058_RS08950 Gfo/Idh/MocA family oxidoreductase + insig.
HMPREF1058_RS08945 HMPREF1058_RS08945 FecR domain-containing protein - strong
HMPREF1058_RS08940 HMPREF1058_RS08940 RNA polymerase sigma-70 factor - insig.
HMPREF1058_RS08935 HMPREF1058_RS08935 outer membrane beta-barrel protein - insig.
HMPREF1058_RS08930 HMPREF1058_RS08930 DUF4981 domain-containing protein - sig.
HMPREF1058_RS08925 HMPREF1058_RS08925 ion transporter + insig.
HMPREF1058_RS08920 HMPREF1058_RS08920 lytic transglycosylase domain-containing protein - insig.
HMPREF1058_RS08915 HMPREF1058_RS08915 AraC family transcriptional regulator - strong
HMPREF1058_RS08910 HMPREF1058_RS08910 response regulator + insig.

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