Gene info for HMPREF1058_RS08905 in Phocaeicola vulgatus CL09T03C04

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, + strand, nucleotides 1,000,375 to 1,003,446
See nucleotide sequence around HMPREF1058_RS08905 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I8ZUC6

Nearby Genes

500 ntHMPREF1058_RS08930 and HMPREF1058_RS08925 are separated by 115 nucleotidesHMPREF1058_RS08925 and HMPREF1058_RS08920 are separated by 25 nucleotidesHMPREF1058_RS08920 and HMPREF1058_RS08915 are separated by 7 nucleotidesHMPREF1058_RS08915 and HMPREF1058_RS08910 are separated by 148 nucleotidesHMPREF1058_RS08910 and HMPREF1058_RS08905 are separated by 140 nucleotidesHMPREF1058_RS08905 and HMPREF1058_RS08900 are separated by 11 nucleotidesHMPREF1058_RS08900 and HMPREF1058_RS08895 are separated by 168 nucleotidesHMPREF1058_RS08895 and HMPREF1058_RS08890 are separated by 105 nucleotidesHMPREF1058_RS08890 and HMPREF1058_RS08885 are separated by 152 nucleotidesHMPREF1058_RS08885 and HMPREF1058_RS08880 are separated by 10 nucleotides HMPREF1058_RS08930: HMPREF1058_RS08930 - DUF4981 domain-containing protein, at 989,905 to 993,000 _RS08930 HMPREF1058_RS08925: HMPREF1058_RS08925 - ion transporter, at 993,116 to 993,973 _RS08925 HMPREF1058_RS08920: HMPREF1058_RS08920 - lytic transglycosylase domain-containing protein, at 993,999 to 994,997 _RS08920 HMPREF1058_RS08915: HMPREF1058_RS08915 - AraC family transcriptional regulator, at 995,005 to 995,925 _RS08915 HMPREF1058_RS08910: HMPREF1058_RS08910 - response regulator, at 996,074 to 1,000,234 _RS08910 HMPREF1058_RS08905: HMPREF1058_RS08905 - TonB-dependent receptor, at 1,000,375 to 1,003,446 _RS08905 HMPREF1058_RS08900: HMPREF1058_RS08900 - RagB/SusD family nutrient uptake outer membrane protein, at 1,003,458 to 1,005,077 _RS08900 HMPREF1058_RS08895: HMPREF1058_RS08895 - right-handed parallel beta-helix repeat-containing protein, at 1,005,246 to 1,006,760 _RS08895 HMPREF1058_RS08890: HMPREF1058_RS08890 - DUF4251 domain-containing protein, at 1,006,866 to 1,007,363 _RS08890 HMPREF1058_RS08885: HMPREF1058_RS08885 - transposase, at 1,007,516 to 1,008,520 _RS08885 HMPREF1058_RS08880: HMPREF1058_RS08880 - transposase family protein, at 1,008,531 to 1,008,881 _RS08880
Locus Name Description Strand Phenotype
HMPREF1058_RS08930 HMPREF1058_RS08930 DUF4981 domain-containing protein - sig.
HMPREF1058_RS08925 HMPREF1058_RS08925 ion transporter + insig.
HMPREF1058_RS08920 HMPREF1058_RS08920 lytic transglycosylase domain-containing protein - insig.
HMPREF1058_RS08915 HMPREF1058_RS08915 AraC family transcriptional regulator - strong
HMPREF1058_RS08910 HMPREF1058_RS08910 response regulator + insig.
HMPREF1058_RS08905 HMPREF1058_RS08905 TonB-dependent receptor + insig.
HMPREF1058_RS08900 HMPREF1058_RS08900 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1058_RS08895 HMPREF1058_RS08895 right-handed parallel beta-helix repeat-containing protein + cofit
HMPREF1058_RS08890 HMPREF1058_RS08890 DUF4251 domain-containing protein - insig.
HMPREF1058_RS08885 HMPREF1058_RS08885 transposase - no data
HMPREF1058_RS08880 HMPREF1058_RS08880 transposase family protein - no data

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