Gene info for HMPREF1058_RS08200 in Phocaeicola vulgatus CL09T03C04

Annotation: GH92 family glycosyl hydrolase
Type 1: Protein-coding gene
Located on scaffold NZ_JH724284, + strand, nucleotides 12,250 to 15,675
See nucleotide sequence around HMPREF1058_RS08200 or for all of scaffold NZ_JH724284

Other databases: NCBI, uniprot: I8ZPZ1

Nearby Genes

500 ntHMPREF1058_RS08225 and HMPREF1058_RS08220 are separated by 24 nucleotidesHMPREF1058_RS08220 and HMPREF1058_RS08215 are separated by 125 nucleotidesHMPREF1058_RS08215 and HMPREF1058_RS08210 are separated by 10 nucleotidesHMPREF1058_RS08210 and HMPREF1058_RS08205 are separated by 151 nucleotidesHMPREF1058_RS08205 and HMPREF1058_RS08200 overlap by 4 nucleotidesHMPREF1058_RS08200 and HMPREF1058_RS08195 are separated by 153 nucleotidesHMPREF1058_RS08195 and HMPREF1058_RS08190 are separated by 135 nucleotidesHMPREF1058_RS08190 and HMPREF1058_RS08185 are separated by 89 nucleotidesHMPREF1058_RS08185 and HMPREF1058_RS08180 are separated by 158 nucleotidesHMPREF1058_RS08180 and HMPREF1058_RS08175 are separated by 200 nucleotides HMPREF1058_RS08225: HMPREF1058_RS08225 - glycoside hydrolase family 88 protein, at 3,331 to 4,557 _RS08225 HMPREF1058_RS08220: HMPREF1058_RS08220 - RNA polymerase sigma-70 factor, at 4,582 to 5,127 _RS08220 HMPREF1058_RS08215: HMPREF1058_RS08215 - TonB-dependent receptor, at 5,253 to 8,330 _RS08215 HMPREF1058_RS08210: HMPREF1058_RS08210 - RagB/SusD family nutrient uptake outer membrane protein, at 8,341 to 10,167 _RS08210 HMPREF1058_RS08205: HMPREF1058_RS08205 - glycoside hydrolase family 97 protein, at 10,319 to 12,253 _RS08205 HMPREF1058_RS08200: HMPREF1058_RS08200 - GH92 family glycosyl hydrolase, at 12,250 to 15,675 _RS08200 HMPREF1058_RS08195: HMPREF1058_RS08195 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 15,829 to 18,195 _RS08195 HMPREF1058_RS08190: HMPREF1058_RS08190 - hypothetical protein, at 18,331 to 19,932 _RS08190 HMPREF1058_RS08185: HMPREF1058_RS08185 - heparinase II/III family protein, at 20,022 to 22,760 _RS08185 HMPREF1058_RS08180: HMPREF1058_RS08180 - helix-turn-helix domain-containing protein, at 22,919 to 25,732 _RS08180 HMPREF1058_RS08175: HMPREF1058_RS08175 - sigma-70 family RNA polymerase sigma factor, at 25,933 to 26,448 _RS08175
Locus Name Description Strand Phenotype
HMPREF1058_RS08225 HMPREF1058_RS08225 glycoside hydrolase family 88 protein + insig.
HMPREF1058_RS08220 HMPREF1058_RS08220 RNA polymerase sigma-70 factor + insig.
HMPREF1058_RS08215 HMPREF1058_RS08215 TonB-dependent receptor + insig.
HMPREF1058_RS08210 HMPREF1058_RS08210 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1058_RS08205 HMPREF1058_RS08205 glycoside hydrolase family 97 protein + insig.
HMPREF1058_RS08200 HMPREF1058_RS08200 GH92 family glycosyl hydrolase + insig.
HMPREF1058_RS08195 HMPREF1058_RS08195 glycoside hydrolase family 3 C-terminal domain-containing protein - insig.
HMPREF1058_RS08190 HMPREF1058_RS08190 hypothetical protein + insig.
HMPREF1058_RS08185 HMPREF1058_RS08185 heparinase II/III family protein + insig.
HMPREF1058_RS08180 HMPREF1058_RS08180 helix-turn-helix domain-containing protein + insig.
HMPREF1058_RS08175 HMPREF1058_RS08175 sigma-70 family RNA polymerase sigma factor + insig.

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