Gene info for HMPREF1058_RS08170 in Phocaeicola vulgatus CL09T03C04

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH724284, + strand, nucleotides 26,492 to 29,839
See nucleotide sequence around HMPREF1058_RS08170 or for all of scaffold NZ_JH724284

Other databases: NCBI, uniprot: I9U5Y1

Nearby Genes

500 ntHMPREF1058_RS08195 and HMPREF1058_RS08190 are separated by 135 nucleotidesHMPREF1058_RS08190 and HMPREF1058_RS08185 are separated by 89 nucleotidesHMPREF1058_RS08185 and HMPREF1058_RS08180 are separated by 158 nucleotidesHMPREF1058_RS08180 and HMPREF1058_RS08175 are separated by 200 nucleotidesHMPREF1058_RS08175 and HMPREF1058_RS08170 are separated by 43 nucleotidesHMPREF1058_RS08170 and HMPREF1058_RS08165 are separated by 25 nucleotidesHMPREF1058_RS08165 and HMPREF1058_RS08160 are separated by 113 nucleotidesHMPREF1058_RS08160 and HMPREF1058_RS08155 are separated by 27 nucleotidesHMPREF1058_RS08155 and HMPREF1058_RS08150 overlap by 4 nucleotidesHMPREF1058_RS08150 and HMPREF1058_RS08145 are separated by 190 nucleotides HMPREF1058_RS08195: HMPREF1058_RS08195 - glycoside hydrolase family 3 C-terminal domain-containing protein, at 15,829 to 18,195 _RS08195 HMPREF1058_RS08190: HMPREF1058_RS08190 - hypothetical protein, at 18,331 to 19,932 _RS08190 HMPREF1058_RS08185: HMPREF1058_RS08185 - heparinase II/III family protein, at 20,022 to 22,760 _RS08185 HMPREF1058_RS08180: HMPREF1058_RS08180 - helix-turn-helix domain-containing protein, at 22,919 to 25,732 _RS08180 HMPREF1058_RS08175: HMPREF1058_RS08175 - sigma-70 family RNA polymerase sigma factor, at 25,933 to 26,448 _RS08175 HMPREF1058_RS08170: HMPREF1058_RS08170 - TonB-dependent receptor, at 26,492 to 29,839 _RS08170 HMPREF1058_RS08165: HMPREF1058_RS08165 - RagB/SusD family nutrient uptake outer membrane protein, at 29,865 to 31,805 _RS08165 HMPREF1058_RS08160: HMPREF1058_RS08160 - alpha-L-arabinofuranosidase, at 31,919 to 34,402 _RS08160 HMPREF1058_RS08155: HMPREF1058_RS08155 - glycosyl hydrolase family 30, at 34,430 to 35,857 _RS08155 HMPREF1058_RS08150: HMPREF1058_RS08150 - hypothetical protein, at 35,854 to 37,287 _RS08150 HMPREF1058_RS08145: HMPREF1058_RS08145 - PD-(D/E)XK nuclease family transposase, at 37,478 to 38,398 _RS08145
Locus Name Description Strand Phenotype
HMPREF1058_RS08195 HMPREF1058_RS08195 glycoside hydrolase family 3 C-terminal domain-containing protein - insig.
HMPREF1058_RS08190 HMPREF1058_RS08190 hypothetical protein + insig.
HMPREF1058_RS08185 HMPREF1058_RS08185 heparinase II/III family protein + insig.
HMPREF1058_RS08180 HMPREF1058_RS08180 helix-turn-helix domain-containing protein + insig.
HMPREF1058_RS08175 HMPREF1058_RS08175 sigma-70 family RNA polymerase sigma factor + insig.
HMPREF1058_RS08170 HMPREF1058_RS08170 TonB-dependent receptor + insig.
HMPREF1058_RS08165 HMPREF1058_RS08165 RagB/SusD family nutrient uptake outer membrane protein + insig.
HMPREF1058_RS08160 HMPREF1058_RS08160 alpha-L-arabinofuranosidase + insig.
HMPREF1058_RS08155 HMPREF1058_RS08155 glycosyl hydrolase family 30 + insig.
HMPREF1058_RS08150 HMPREF1058_RS08150 hypothetical protein + insig.
HMPREF1058_RS08145 HMPREF1058_RS08145 PD-(D/E)XK nuclease family transposase + insig.

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