Gene info for HMPREF1058_RS08090 in Phocaeicola vulgatus CL09T03C04

Annotation: tetratricopeptide repeat protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724284, + strand, nucleotides 55,139 to 56,482
See nucleotide sequence around HMPREF1058_RS08090 or for all of scaffold NZ_JH724284

Other databases: NCBI, uniprot: I9U6S1

Nearby Genes

500 ntHMPREF1058_RS08115 and HMPREF1058_RS08110 are separated by 153 nucleotidesHMPREF1058_RS08110 and HMPREF1058_RS08105 are separated by 17 nucleotidesHMPREF1058_RS08105 and HMPREF1058_RS08100 are separated by 210 nucleotidesHMPREF1058_RS08100 and HMPREF1058_RS08095 are separated by 33 nucleotidesHMPREF1058_RS08095 and HMPREF1058_RS08090 are separated by 10 nucleotidesHMPREF1058_RS08090 and HMPREF1058_RS08085 are separated by 30 nucleotidesHMPREF1058_RS08085 and HMPREF1058_RS08080 are separated by 20 nucleotidesHMPREF1058_RS08080 and HMPREF1058_RS08075 are separated by 121 nucleotidesHMPREF1058_RS08075 and HMPREF1058_RS08070 are separated by 177 nucleotidesHMPREF1058_RS08070 and HMPREF1058_RS08065 are separated by 8 nucleotides HMPREF1058_RS08115: HMPREF1058_RS08115 - glycoside hydrolase family 97 protein, at 47,654 to 49,591 _RS08115 HMPREF1058_RS08110: HMPREF1058_RS08110 - glycosyl hydrolase 43 family protein, at 49,745 to 51,394 _RS08110 HMPREF1058_RS08105: HMPREF1058_RS08105 - glycoside hydrolase family 88 protein, at 51,412 to 52,635 _RS08105 HMPREF1058_RS08100: HMPREF1058_RS08100 - BlaI/MecI/CopY family transcriptional regulator, at 52,846 to 53,208 _RS08100 HMPREF1058_RS08095: HMPREF1058_RS08095 - M56 family metallopeptidase, at 53,242 to 55,128 _RS08095 HMPREF1058_RS08090: HMPREF1058_RS08090 - tetratricopeptide repeat protein, at 55,139 to 56,482 _RS08090 HMPREF1058_RS08085: HMPREF1058_RS08085 - redoxin domain-containing protein, at 56,513 to 57,703 _RS08085 HMPREF1058_RS08080: HMPREF1058_RS08080 - TlpA family protein disulfide reductase, at 57,724 to 59,832 _RS08080 HMPREF1058_RS08075: HMPREF1058_RS08075 - hypothetical protein, at 59,954 to 60,727 _RS08075 HMPREF1058_RS08070: HMPREF1058_RS08070 - alpha-L-fucosidase, at 60,905 to 62,944 _RS08070 HMPREF1058_RS08065: HMPREF1058_RS08065 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 62,953 to 63,855 _RS08065
Locus Name Description Strand Phenotype
HMPREF1058_RS08115 HMPREF1058_RS08115 glycoside hydrolase family 97 protein + insig.
HMPREF1058_RS08110 HMPREF1058_RS08110 glycosyl hydrolase 43 family protein + insig.
HMPREF1058_RS08105 HMPREF1058_RS08105 glycoside hydrolase family 88 protein + strong
HMPREF1058_RS08100 HMPREF1058_RS08100 BlaI/MecI/CopY family transcriptional regulator + insig.
HMPREF1058_RS08095 HMPREF1058_RS08095 M56 family metallopeptidase + insig.
HMPREF1058_RS08090 HMPREF1058_RS08090 tetratricopeptide repeat protein + insig.
HMPREF1058_RS08085 HMPREF1058_RS08085 redoxin domain-containing protein + insig.
HMPREF1058_RS08080 HMPREF1058_RS08080 TlpA family protein disulfide reductase + insig.
HMPREF1058_RS08075 HMPREF1058_RS08075 hypothetical protein + insig.
HMPREF1058_RS08070 HMPREF1058_RS08070 alpha-L-fucosidase - insig.
HMPREF1058_RS08065 HMPREF1058_RS08065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA - strong

Or browse nearby genes

Or see the comparative fitness browser