Gene info for HMPREF1058_RS08040 in Phocaeicola vulgatus CL09T03C04

Annotation: HD domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724284, - strand, nucleotides 67,881 to 69,116
See nucleotide sequence around HMPREF1058_RS08040 or for all of scaffold NZ_JH724284

Other databases: NCBI, uniprot: I9IV55

Nearby Genes

500 ntHMPREF1058_RS08065 and HMPREF1058_RS08060 are separated by 51 nucleotidesHMPREF1058_RS08060 and HMPREF1058_RS08055 are separated by 62 nucleotidesHMPREF1058_RS08055 and HMPREF1058_RS08050 are separated by 16 nucleotidesHMPREF1058_RS08050 and HMPREF1058_RS08045 are separated by 5 nucleotidesHMPREF1058_RS08045 and HMPREF1058_RS08040 are separated by 132 nucleotidesHMPREF1058_RS08040 and HMPREF1058_RS08035 are separated by 88 nucleotidesHMPREF1058_RS08035 and HMPREF1058_RS08030 are separated by 36 nucleotidesHMPREF1058_RS08030 and HMPREF1058_RS08025 are separated by 242 nucleotidesHMPREF1058_RS08025 and HMPREF1058_RS08020 are separated by 1236 nucleotidesHMPREF1058_RS08020 and HMPREF1058_RS08015 are separated by 2 nucleotides HMPREF1058_RS08065: HMPREF1058_RS08065 - tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA, at 62,953 to 63,855 _RS08065 HMPREF1058_RS08060: HMPREF1058_RS08060 - hypothetical protein, at 63,907 to 64,470 _RS08060 HMPREF1058_RS08055: HMPREF1058_RS08055 - acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase, at 64,533 to 65,300 _RS08055 HMPREF1058_RS08050: HMPREF1058_RS08050 - bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase, at 65,317 to 66,702 _RS08050 HMPREF1058_RS08045: HMPREF1058_RS08045 - UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase, at 66,708 to 67,748 _RS08045 HMPREF1058_RS08040: HMPREF1058_RS08040 - HD domain-containing protein, at 67,881 to 69,116 _RS08040 HMPREF1058_RS08035: HMPREF1058_RS08035 - orotidine-5'-phosphate decarboxylase, at 69,205 to 70,023 _RS08035 HMPREF1058_RS08030: HMPREF1058_RS08030 - peptide chain release factor 1, at 70,060 to 71,175 _RS08030 HMPREF1058_RS08025: HMPREF1058_RS08025 - phosphoribosylformylglycinamidine cyclo-ligase, at 71,418 to 72,587 _RS08025 HMPREF1058_RS08020: HMPREF1058_RS08020 - hypothetical protein, at 73,824 to 74,417 _RS08020 HMPREF1058_RS08015: HMPREF1058_RS08015 - virulence RhuM family protein, at 74,420 to 75,418 _RS08015
Locus Name Description Strand Phenotype
HMPREF1058_RS08065 HMPREF1058_RS08065 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA - strong
HMPREF1058_RS08060 HMPREF1058_RS08060 hypothetical protein - strong
HMPREF1058_RS08055 HMPREF1058_RS08055 acyl-ACP--UDP-N-acetylglucosamine O-acyltransferase - no data
HMPREF1058_RS08050 HMPREF1058_RS08050 bifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/3-hydroxyacyl-ACP dehydratase - no data
HMPREF1058_RS08045 HMPREF1058_RS08045 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase - no data
HMPREF1058_RS08040 HMPREF1058_RS08040 HD domain-containing protein - sig.
HMPREF1058_RS08035 HMPREF1058_RS08035 orotidine-5'-phosphate decarboxylase - no data
HMPREF1058_RS08030 HMPREF1058_RS08030 peptide chain release factor 1 - no data
HMPREF1058_RS08025 HMPREF1058_RS08025 phosphoribosylformylglycinamidine cyclo-ligase - strong
HMPREF1058_RS08020 HMPREF1058_RS08020 hypothetical protein + insig.
HMPREF1058_RS08015 HMPREF1058_RS08015 virulence RhuM family protein + insig.

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