Gene info for HMPREF1058_RS03965 in Phocaeicola vulgatus CL09T03C04

Annotation: helix-turn-helix transcriptional regulator
Type 1: Protein-coding gene
Located on scaffold NZ_JH724286, - strand, nucleotides 149,334 to 149,786
See nucleotide sequence around HMPREF1058_RS03965 or for all of scaffold NZ_JH724286

Other databases: NCBI, uniprot: I8ZIJ8

Nearby Genes

500 ntHMPREF1058_RS03990 and HMPREF1058_RS03985 are separated by 101 nucleotidesHMPREF1058_RS03985 and HMPREF1058_RS03980 are separated by 98 nucleotidesHMPREF1058_RS03980 and HMPREF1058_RS03975 are separated by 365 nucleotidesHMPREF1058_RS03975 and HMPREF1058_RS03970 overlap by 13 nucleotidesHMPREF1058_RS03970 and HMPREF1058_RS03965 are separated by 93 nucleotidesHMPREF1058_RS03965 and HMPREF1058_RS03960 are separated by 1120 nucleotidesHMPREF1058_RS03960 and HMPREF1058_RS03955 are separated by 11 nucleotidesHMPREF1058_RS03955 and HMPREF1058_RS03950 are separated by 57 nucleotidesHMPREF1058_RS03950 and HMPREF1058_RS03945 are separated by 100 nucleotidesHMPREF1058_RS03945 and HMPREF1058_RS03940 are separated by 8 nucleotides HMPREF1058_RS03990: HMPREF1058_RS03990 - 4-hydroxy-tetrahydrodipicolinate synthase, at 143,431 to 144,324 _RS03990 HMPREF1058_RS03985: HMPREF1058_RS03985 - NAD-dependent DNA ligase LigA, at 144,426 to 146,423 _RS03985 HMPREF1058_RS03980: HMPREF1058_RS03980 - tRNA (guanosine(37)-N1)-methyltransferase TrmD, at 146,522 to 147,196 _RS03980 HMPREF1058_RS03975: HMPREF1058_RS03975 - dihydroorotate dehydrogenase, at 147,562 to 148,473 _RS03975 HMPREF1058_RS03970: HMPREF1058_RS03970 - dihydroorotate dehydrogenase electron transfer subunit, at 148,461 to 149,240 _RS03970 HMPREF1058_RS03965: HMPREF1058_RS03965 - helix-turn-helix transcriptional regulator, at 149,334 to 149,786 _RS03965 HMPREF1058_RS03960: HMPREF1058_RS03960 - DNA polymerase III subunit delta, at 150,907 to 151,923 _RS03960 HMPREF1058_RS03955: HMPREF1058_RS03955 - AMP nucleosidase, at 151,935 to 152,711 _RS03955 HMPREF1058_RS03950: HMPREF1058_RS03950 - type I restriction enzyme HsdR N-terminal domain-containing protein, at 152,769 to 153,218 _RS03950 HMPREF1058_RS03945: HMPREF1058_RS03945 - hypothetical protein, at 153,319 to 154,110 _RS03945 HMPREF1058_RS03940: HMPREF1058_RS03940 - Nif3-like dinuclear metal center hexameric protein, at 154,119 to 155,213 _RS03940
Locus Name Description Strand Phenotype
HMPREF1058_RS03990 HMPREF1058_RS03990 4-hydroxy-tetrahydrodipicolinate synthase - no data
HMPREF1058_RS03985 HMPREF1058_RS03985 NAD-dependent DNA ligase LigA - no data
HMPREF1058_RS03980 HMPREF1058_RS03980 tRNA (guanosine(37)-N1)-methyltransferase TrmD + strong
HMPREF1058_RS03975 HMPREF1058_RS03975 dihydroorotate dehydrogenase - no data
HMPREF1058_RS03970 HMPREF1058_RS03970 dihydroorotate dehydrogenase electron transfer subunit - cofit
HMPREF1058_RS03965 HMPREF1058_RS03965 helix-turn-helix transcriptional regulator - no data
HMPREF1058_RS03960 HMPREF1058_RS03960 DNA polymerase III subunit delta - no data
HMPREF1058_RS03955 HMPREF1058_RS03955 AMP nucleosidase - no data
HMPREF1058_RS03950 HMPREF1058_RS03950 type I restriction enzyme HsdR N-terminal domain-containing protein + sig.
HMPREF1058_RS03945 HMPREF1058_RS03945 hypothetical protein - no data
HMPREF1058_RS03940 HMPREF1058_RS03940 Nif3-like dinuclear metal center hexameric protein - cofit

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