Gene info for HMPREF1058_RS02405 in Phocaeicola vulgatus CL09T03C04

Annotation: methylmalonyl-CoA mutase small subunit
Type 1: Protein-coding gene
Located on scaffold NZ_JH724287, - strand, nucleotides 196,772 to 198,682
See nucleotide sequence around HMPREF1058_RS02405 or for all of scaffold NZ_JH724287

Other databases: NCBI, uniprot: I9IKV2

Nearby Genes

500 ntHMPREF1058_RS0120010 and HMPREF1058_RS02425 are separated by 144 nucleotidesHMPREF1058_RS02425 and HMPREF1058_RS02420 are separated by 440 nucleotidesHMPREF1058_RS02420 and HMPREF1058_RS02415 are separated by 13 nucleotidesHMPREF1058_RS02415 and HMPREF1058_RS02410 are separated by 322 nucleotidesHMPREF1058_RS02410 and HMPREF1058_RS02405 are separated by 9 nucleotidesHMPREF1058_RS02405 and HMPREF1058_RS02400 are separated by 285 nucleotidesHMPREF1058_RS02400 and HMPREF1058_RS02395 are separated by 115 nucleotidesHMPREF1058_RS02395 and HMPREF1058_RS02390 are separated by 39 nucleotidesHMPREF1058_RS02390 and HMPREF1058_RS02385 are separated by 129 nucleotidesHMPREF1058_RS02385 and HMPREF1058_RS02380 are separated by 144 nucleotides HMPREF1058_RS0120010: HMPREF1058_RS0120010 - TonB-dependent receptor, at 186,267 to 188,592 _RS0120010 HMPREF1058_RS02425: HMPREF1058_RS02425 - DUF1232 domain-containing protein, at 188,737 to 189,099 _RS02425 HMPREF1058_RS02420: HMPREF1058_RS02420 - TonB-dependent receptor, at 189,540 to 192,785 _RS02420 HMPREF1058_RS02415: HMPREF1058_RS02415 - RagB/SusD family nutrient uptake outer membrane protein, at 192,799 to 194,289 _RS02415 HMPREF1058_RS02410: HMPREF1058_RS02410 - methylmalonyl-CoA mutase, at 194,612 to 196,762 _RS02410 HMPREF1058_RS02405: HMPREF1058_RS02405 - methylmalonyl-CoA mutase small subunit, at 196,772 to 198,682 _RS02405 HMPREF1058_RS02400: HMPREF1058_RS02400 - putative transporter, at 198,968 to 200,638 _RS02400 HMPREF1058_RS02395: HMPREF1058_RS02395 - ABC-F family ATP-binding cassette domain-containing protein, at 200,754 to 202,388 _RS02395 HMPREF1058_RS02390: HMPREF1058_RS02390 - RNA polymerase sigma-70 factor, at 202,428 to 203,009 _RS02390 HMPREF1058_RS02385: HMPREF1058_RS02385 - FecR family protein, at 203,139 to 204,125 _RS02385 HMPREF1058_RS02380: HMPREF1058_RS02380 - TonB-dependent receptor, at 204,270 to 207,686 _RS02380
Locus Name Description Strand Phenotype
HMPREF1058_RS0120010 HMPREF1058_RS0120010 TonB-dependent receptor + insig.
HMPREF1058_RS02425 HMPREF1058_RS02425 DUF1232 domain-containing protein + insig.
HMPREF1058_RS02420 HMPREF1058_RS02420 TonB-dependent receptor + cofit
HMPREF1058_RS02415 HMPREF1058_RS02415 RagB/SusD family nutrient uptake outer membrane protein + cofit
HMPREF1058_RS02410 HMPREF1058_RS02410 methylmalonyl-CoA mutase - strong
HMPREF1058_RS02405 HMPREF1058_RS02405 methylmalonyl-CoA mutase small subunit - strong
HMPREF1058_RS02400 HMPREF1058_RS02400 putative transporter + strong
HMPREF1058_RS02395 HMPREF1058_RS02395 ABC-F family ATP-binding cassette domain-containing protein + insig.
HMPREF1058_RS02390 HMPREF1058_RS02390 RNA polymerase sigma-70 factor + insig.
HMPREF1058_RS02385 HMPREF1058_RS02385 FecR family protein + sig.
HMPREF1058_RS02380 HMPREF1058_RS02380 TonB-dependent receptor + insig.

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