Gene info for HMPREF1058_RS0120105 in Phocaeicola vulgatus CL09T03C04

Annotation: phage integrase SAM-like domain-containing protein
Type 7: Pseudogene derived from a protein-coding gene
Located on scaffold NZ_JH724288, + strand, nucleotides 161,309 to 161,902
See nucleotide sequence around HMPREF1058_RS0120105 or for all of scaffold NZ_JH724288

Nearby Genes

500 ntHMPREF1058_RS01330 and HMPREF1058_RS01325 are separated by 397 nucleotidesHMPREF1058_RS01325 and HMPREF1058_RS01320 are separated by 12 nucleotidesHMPREF1058_RS01320 and HMPREF1058_RS01315 are separated by 800 nucleotidesHMPREF1058_RS01315 and HMPREF1058_RS01310 are separated by 705 nucleotidesHMPREF1058_RS01310 and HMPREF1058_RS0120105 are separated by 205 nucleotidesHMPREF1058_RS0120105 and HMPREF1058_RS20305 overlap by 5 nucleotidesHMPREF1058_RS20305 and HMPREF1058_RS21210 are separated by 754 nucleotidesHMPREF1058_RS21210 and HMPREF1058_RS01290 are separated by 780 nucleotidesHMPREF1058_RS01290 and HMPREF1058_RS01285 are separated by 51 nucleotidesHMPREF1058_RS01285 and HMPREF1058_RS01280 overlap by 7 nucleotides HMPREF1058_RS01330: HMPREF1058_RS01330 - hypothetical protein, at 151,840 to 153,093 _RS01330 HMPREF1058_RS01325: HMPREF1058_RS01325 - RagB/SusD family nutrient uptake outer membrane protein, at 153,491 to 155,026 _RS01325 HMPREF1058_RS01320: HMPREF1058_RS01320 - TonB-dependent receptor, at 155,039 to 158,155 _RS01320 HMPREF1058_RS01315: HMPREF1058_RS01315 - 6-bladed beta-propeller, at 158,956 to 160,092 _RS01315 HMPREF1058_RS01310: HMPREF1058_RS01310 - hypothetical protein, at 160,798 to 161,103 _RS01310 HMPREF1058_RS0120105: HMPREF1058_RS0120105 - phage integrase SAM-like domain-containing protein, at 161,309 to 161,902 _RS0120105 HMPREF1058_RS20305: HMPREF1058_RS20305 - hypothetical protein, at 161,898 to 162,632 _RS20305 HMPREF1058_RS21210: HMPREF1058_RS21210 - hypothetical protein, at 163,387 to 163,640 _RS21210 HMPREF1058_RS01290: HMPREF1058_RS01290 - DUF1622 domain-containing protein, at 164,421 to 164,762 _RS01290 HMPREF1058_RS01285: HMPREF1058_RS01285 - alpha-ribazole phosphatase, at 164,814 to 165,344 _RS01285 HMPREF1058_RS01280: HMPREF1058_RS01280 - adenosylcobinamide-GDP ribazoletransferase, at 165,338 to 166,087 _RS01280
Locus Name Description Strand Phenotype
HMPREF1058_RS01330 HMPREF1058_RS01330 hypothetical protein - insig.
HMPREF1058_RS01325 HMPREF1058_RS01325 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS01320 HMPREF1058_RS01320 TonB-dependent receptor - insig.
HMPREF1058_RS01315 HMPREF1058_RS01315 6-bladed beta-propeller - insig.
HMPREF1058_RS01310 HMPREF1058_RS01310 hypothetical protein - no data
HMPREF1058_RS0120105 HMPREF1058_RS0120105 phage integrase SAM-like domain-containing protein + no data
HMPREF1058_RS20305 HMPREF1058_RS20305 hypothetical protein - insig.
HMPREF1058_RS21210 HMPREF1058_RS21210 hypothetical protein + insig.
HMPREF1058_RS01290 HMPREF1058_RS01290 DUF1622 domain-containing protein - insig.
HMPREF1058_RS01285 HMPREF1058_RS01285 alpha-ribazole phosphatase - insig.
HMPREF1058_RS01280 HMPREF1058_RS01280 adenosylcobinamide-GDP ribazoletransferase - strong

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