Gene info for HMPREF1058_RS0119610 in Phocaeicola vulgatus CL09T03C04

Annotation: TonB-dependent receptor
Type 1: Protein-coding gene
Located on scaffold NZ_JH724283, + strand, nucleotides 215,557 to 217,956
See nucleotide sequence around HMPREF1058_RS0119610 or for all of scaffold NZ_JH724283

Other databases: NCBI, uniprot: I9UC69

Nearby Genes

500 ntHMPREF1058_RS12070 and HMPREF1058_RS12065 are separated by 6 nucleotidesHMPREF1058_RS12065 and HMPREF1058_RS12060 are separated by 199 nucleotidesHMPREF1058_RS12060 and HMPREF1058_RS12055 are separated by 191 nucleotidesHMPREF1058_RS12055 and HMPREF1058_RS12050 are separated by 48 nucleotidesHMPREF1058_RS12050 and HMPREF1058_RS0119610 are separated by 50 nucleotidesHMPREF1058_RS0119610 and HMPREF1058_RS12045 are separated by 729 nucleotidesHMPREF1058_RS12045 and HMPREF1058_RS12040 are separated by 137 nucleotidesHMPREF1058_RS12040 and HMPREF1058_RS12035 are separated by 98 nucleotidesHMPREF1058_RS12035 and HMPREF1058_RS12030 are separated by 82 nucleotidesHMPREF1058_RS12030 and HMPREF1058_RS12025 are separated by 68 nucleotides HMPREF1058_RS12070: HMPREF1058_RS12070 - Lrp/AsnC ligand binding domain-containing protein, at 209,978 to 210,436 _RS12070 HMPREF1058_RS12065: HMPREF1058_RS12065 - DUF4491 family protein, at 210,443 to 210,757 _RS12065 HMPREF1058_RS12060: HMPREF1058_RS12060 - outer membrane beta-barrel protein, at 210,957 to 213,236 _RS12060 HMPREF1058_RS12055: HMPREF1058_RS12055 - HAMP domain-containing histidine kinase, at 213,428 to 214,789 _RS12055 HMPREF1058_RS12050: HMPREF1058_RS12050 - response regulator transcription factor, at 214,838 to 215,506 _RS12050 HMPREF1058_RS0119610: HMPREF1058_RS0119610 - TonB-dependent receptor, at 215,557 to 217,956 _RS0119610 HMPREF1058_RS12045: HMPREF1058_RS12045 - DUF3874 domain-containing protein, at 218,686 to 219,936 _RS12045 HMPREF1058_RS12040: HMPREF1058_RS12040 - butyrate kinase, at 220,074 to 221,138 _RS12040 HMPREF1058_RS12035: HMPREF1058_RS12035 - phosphate butyryltransferase, at 221,237 to 222,145 _RS12035 HMPREF1058_RS12030: HMPREF1058_RS12030 - gamma-glutamyl-gamma-aminobutyrate hydrolase family protein, at 222,228 to 223,985 _RS12030 HMPREF1058_RS12025: HMPREF1058_RS12025 - M28 family peptidase, at 224,054 to 225,058 _RS12025
Locus Name Description Strand Phenotype
HMPREF1058_RS12070 HMPREF1058_RS12070 Lrp/AsnC ligand binding domain-containing protein + strong
HMPREF1058_RS12065 HMPREF1058_RS12065 DUF4491 family protein + strong
HMPREF1058_RS12060 HMPREF1058_RS12060 outer membrane beta-barrel protein - insig.
HMPREF1058_RS12055 HMPREF1058_RS12055 HAMP domain-containing histidine kinase + insig.
HMPREF1058_RS12050 HMPREF1058_RS12050 response regulator transcription factor + insig.
HMPREF1058_RS0119610 HMPREF1058_RS0119610 TonB-dependent receptor + insig.
HMPREF1058_RS12045 HMPREF1058_RS12045 DUF3874 domain-containing protein + insig.
HMPREF1058_RS12040 HMPREF1058_RS12040 butyrate kinase - strong
HMPREF1058_RS12035 HMPREF1058_RS12035 phosphate butyryltransferase - strong
HMPREF1058_RS12030 HMPREF1058_RS12030 gamma-glutamyl-gamma-aminobutyrate hydrolase family protein + insig.
HMPREF1058_RS12025 HMPREF1058_RS12025 M28 family peptidase + no data

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