Gene info for HMPREF1058_RS0119485 in Phocaeicola vulgatus CL09T03C04

Annotation: DUF1573 domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724282, - strand, nucleotides 1,496,459 to 1,496,728
See nucleotide sequence around HMPREF1058_RS0119485 or for all of scaffold NZ_JH724282

Other databases: NCBI

Nearby Genes

500 ntHMPREF1058_RS13455 and HMPREF1058_RS13450 are separated by 35 nucleotidesHMPREF1058_RS13450 and HMPREF1058_RS13445 are separated by 467 nucleotidesHMPREF1058_RS13445 and HMPREF1058_RS13440 are separated by 294 nucleotidesHMPREF1058_RS13440 and HMPREF1058_RS13435 are separated by 27 nucleotidesHMPREF1058_RS13435 and HMPREF1058_RS0119485 are separated by 286 nucleotidesHMPREF1058_RS0119485 and HMPREF1058_RS13430 are separated by 124 nucleotidesHMPREF1058_RS13430 and HMPREF1058_RS13425 are separated by 328 nucleotidesHMPREF1058_RS13425 and HMPREF1058_RS13420 are separated by 192 nucleotidesHMPREF1058_RS13420 and HMPREF1058_RS13415 are separated by 143 nucleotidesHMPREF1058_RS13415 and HMPREF1058_RS13410 are separated by 208 nucleotides HMPREF1058_RS13455: HMPREF1058_RS13455 - RagB/SusD family nutrient uptake outer membrane protein, at 1,483,143 to 1,485,272 _RS13455 HMPREF1058_RS13450: HMPREF1058_RS13450 - TonB-dependent receptor, at 1,485,308 to 1,488,499 _RS13450 HMPREF1058_RS13445: HMPREF1058_RS13445 - glycoside hydrolase family 2, at 1,488,967 to 1,491,834 _RS13445 HMPREF1058_RS13440: HMPREF1058_RS13440 - DUF2264 domain-containing protein, at 1,492,129 to 1,493,358 _RS13440 HMPREF1058_RS13435: HMPREF1058_RS13435 - helix-turn-helix domain-containing protein, at 1,493,386 to 1,496,172 _RS13435 HMPREF1058_RS0119485: HMPREF1058_RS0119485 - DUF1573 domain-containing protein, at 1,496,459 to 1,496,728 _RS0119485 HMPREF1058_RS13430: HMPREF1058_RS13430 - DUF3874 domain-containing protein, at 1,496,853 to 1,498,250 _RS13430 HMPREF1058_RS13425: HMPREF1058_RS13425 - HU family DNA-binding protein, at 1,498,579 to 1,499,259 _RS13425 HMPREF1058_RS13420: HMPREF1058_RS13420 - RNA polymerase sigma-70 factor, at 1,499,452 to 1,500,018 _RS13420 HMPREF1058_RS13415: HMPREF1058_RS13415 - FecR family protein, at 1,500,162 to 1,501,175 _RS13415 HMPREF1058_RS13410: HMPREF1058_RS13410 - SusC/RagA family TonB-linked outer membrane protein, at 1,501,384 to 1,504,815 _RS13410
Locus Name Description Strand Phenotype
HMPREF1058_RS13455 HMPREF1058_RS13455 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS13450 HMPREF1058_RS13450 TonB-dependent receptor - insig.
HMPREF1058_RS13445 HMPREF1058_RS13445 glycoside hydrolase family 2 - insig.
HMPREF1058_RS13440 HMPREF1058_RS13440 DUF2264 domain-containing protein - insig.
HMPREF1058_RS13435 HMPREF1058_RS13435 helix-turn-helix domain-containing protein - insig.
HMPREF1058_RS0119485 HMPREF1058_RS0119485 DUF1573 domain-containing protein - insig.
HMPREF1058_RS13430 HMPREF1058_RS13430 DUF3874 domain-containing protein - insig.
HMPREF1058_RS13425 HMPREF1058_RS13425 HU family DNA-binding protein + strong
HMPREF1058_RS13420 HMPREF1058_RS13420 RNA polymerase sigma-70 factor - insig.
HMPREF1058_RS13415 HMPREF1058_RS13415 FecR family protein + insig.
HMPREF1058_RS13410 HMPREF1058_RS13410 SusC/RagA family TonB-linked outer membrane protein + insig.

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