Gene info for HMPREF1058_RS00580 in Phocaeicola vulgatus CL09T03C04

Annotation: PAS domain-containing protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724290, + strand, nucleotides 43,762 to 46,062
See nucleotide sequence around HMPREF1058_RS00580 or for all of scaffold NZ_JH724290

Other databases: NCBI, uniprot: I9TT99

Nearby Genes

500 ntHMPREF1058_RS00605 and HMPREF1058_RS00600 are separated by 106 nucleotidesHMPREF1058_RS00600 and HMPREF1058_RS00595 are separated by 175 nucleotidesHMPREF1058_RS00595 and HMPREF1058_RS00590 are separated by 87 nucleotidesHMPREF1058_RS00590 and HMPREF1058_RS00585 are separated by 433 nucleotidesHMPREF1058_RS00585 and HMPREF1058_RS00580 are separated by 92 nucleotidesHMPREF1058_RS00580 and HMPREF1058_RS00575 are separated by 37 nucleotidesHMPREF1058_RS00575 and HMPREF1058_RS00570 are separated by 138 nucleotidesHMPREF1058_RS00570 and HMPREF1058_RS00565 are separated by 4 nucleotidesHMPREF1058_RS00565 and HMPREF1058_RS00560 are separated by 294 nucleotidesHMPREF1058_RS00560 and HMPREF1058_RS00555 are separated by 5 nucleotides HMPREF1058_RS00605: HMPREF1058_RS00605 - prolipoprotein diacylglyceryl transferase, at 36,968 to 37,774 _RS00605 HMPREF1058_RS00600: HMPREF1058_RS00600 - diaminopimelate dehydrogenase, at 37,881 to 38,780 _RS00600 HMPREF1058_RS00595: HMPREF1058_RS00595 - Holliday junction branch migration protein RuvA, at 38,956 to 39,549 _RS00595 HMPREF1058_RS00590: HMPREF1058_RS00590 - hypothetical protein, at 39,637 to 40,461 _RS00590 HMPREF1058_RS00585: HMPREF1058_RS00585 - PAS domain-containing hybrid sensor histidine kinase/response regulator, at 40,895 to 43,669 _RS00585 HMPREF1058_RS00580: HMPREF1058_RS00580 - PAS domain-containing protein, at 43,762 to 46,062 _RS00580 HMPREF1058_RS00575: HMPREF1058_RS00575 - TonB-dependent receptor, at 46,100 to 49,264 _RS00575 HMPREF1058_RS00570: HMPREF1058_RS00570 - HD domain-containing protein, at 49,403 to 50,884 _RS00570 HMPREF1058_RS00565: HMPREF1058_RS00565 - hemolysin III family protein, at 50,889 to 51,524 _RS00565 HMPREF1058_RS00560: HMPREF1058_RS00560 - anaerobic ribonucleoside triphosphate reductase, at 51,819 to 54,095 _RS00560 HMPREF1058_RS00555: HMPREF1058_RS00555 - anaerobic ribonucleoside-triphosphate reductase activating protein, at 54,101 to 54,559 _RS00555
Locus Name Description Strand Phenotype
HMPREF1058_RS00605 HMPREF1058_RS00605 prolipoprotein diacylglyceryl transferase - strong
HMPREF1058_RS00600 HMPREF1058_RS00600 diaminopimelate dehydrogenase - strong
HMPREF1058_RS00595 HMPREF1058_RS00595 Holliday junction branch migration protein RuvA + strong
HMPREF1058_RS00590 HMPREF1058_RS00590 hypothetical protein - strong
HMPREF1058_RS00585 HMPREF1058_RS00585 PAS domain-containing hybrid sensor histidine kinase/response regulator + insig.
HMPREF1058_RS00580 HMPREF1058_RS00580 PAS domain-containing protein + insig.
HMPREF1058_RS00575 HMPREF1058_RS00575 TonB-dependent receptor + insig.
HMPREF1058_RS00570 HMPREF1058_RS00570 HD domain-containing protein + no data
HMPREF1058_RS00565 HMPREF1058_RS00565 hemolysin III family protein + strong
HMPREF1058_RS00560 HMPREF1058_RS00560 anaerobic ribonucleoside triphosphate reductase + strong
HMPREF1058_RS00555 HMPREF1058_RS00555 anaerobic ribonucleoside-triphosphate reductase activating protein + no data

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