Gene info for HMPREF1058_RS00420 in Phocaeicola vulgatus CL09T03C04

Annotation: pseudouridine synthase
Type 1: Protein-coding gene
Located on scaffold NZ_JH724290, - strand, nucleotides 75,513 to 76,976
See nucleotide sequence around HMPREF1058_RS00420 or for all of scaffold NZ_JH724290

Other databases: NCBI, uniprot: I9TU53

Nearby Genes

500 ntHMPREF1058_RS00445 and HMPREF1058_RS00440 are separated by 299 nucleotidesHMPREF1058_RS00440 and HMPREF1058_RS00435 overlap by 11 nucleotidesHMPREF1058_RS00435 and HMPREF1058_RS00430 are separated by 360 nucleotidesHMPREF1058_RS00430 and HMPREF1058_RS00425 are separated by 162 nucleotidesHMPREF1058_RS00425 and HMPREF1058_RS00420 are separated by 22 nucleotidesHMPREF1058_RS00420 and HMPREF1058_RS00415 are separated by 75 nucleotidesHMPREF1058_RS00415 and HMPREF1058_RS00410 are separated by 93 nucleotidesHMPREF1058_RS00410 and HMPREF1058_RS00405 are separated by 162 nucleotidesHMPREF1058_RS00405 and HMPREF1058_RS00400 are separated by 97 nucleotidesHMPREF1058_RS00400 and HMPREF1058_RS00395 overlap by 4 nucleotides HMPREF1058_RS00445: HMPREF1058_RS00445 - 50S ribosomal protein L13, at 71,498 to 71,959 _RS00445 HMPREF1058_RS00440: HMPREF1058_RS00440 - hypothetical protein, at 72,259 to 72,504 _RS00440 HMPREF1058_RS00435: HMPREF1058_RS00435 - zeta toxin family protein, at 72,494 to 73,069 _RS00435 HMPREF1058_RS00430: HMPREF1058_RS00430 - DUF4488 domain-containing protein, at 73,430 to 73,924 _RS00430 HMPREF1058_RS00425: HMPREF1058_RS00425 - asparagine--tRNA ligase, at 74,087 to 75,490 _RS00425 HMPREF1058_RS00420: HMPREF1058_RS00420 - pseudouridine synthase, at 75,513 to 76,976 _RS00420 HMPREF1058_RS00415: HMPREF1058_RS00415 - adenylosuccinate lyase, at 77,052 to 78,398 _RS00415 HMPREF1058_RS00410: HMPREF1058_RS00410 - MATE family efflux transporter, at 78,492 to 79,841 _RS00410 HMPREF1058_RS00405: HMPREF1058_RS00405 - M28 family peptidase, at 80,004 to 81,497 _RS00405 HMPREF1058_RS00400: HMPREF1058_RS00400 - GntR family transcriptional regulator, at 81,595 to 81,960 _RS00400 HMPREF1058_RS00395: HMPREF1058_RS00395 - hypothetical protein, at 81,957 to 82,850 _RS00395
Locus Name Description Strand Phenotype
HMPREF1058_RS00445 HMPREF1058_RS00445 50S ribosomal protein L13 - no data
HMPREF1058_RS00440 HMPREF1058_RS00440 hypothetical protein - sig.
HMPREF1058_RS00435 HMPREF1058_RS00435 zeta toxin family protein - strong
HMPREF1058_RS00430 HMPREF1058_RS00430 DUF4488 domain-containing protein - cofit
HMPREF1058_RS00425 HMPREF1058_RS00425 asparagine--tRNA ligase - no data
HMPREF1058_RS00420 HMPREF1058_RS00420 pseudouridine synthase - no data
HMPREF1058_RS00415 HMPREF1058_RS00415 adenylosuccinate lyase - no data
HMPREF1058_RS00410 HMPREF1058_RS00410 MATE family efflux transporter - cofit
HMPREF1058_RS00405 HMPREF1058_RS00405 M28 family peptidase + insig.
HMPREF1058_RS00400 HMPREF1058_RS00400 GntR family transcriptional regulator - strong
HMPREF1058_RS00395 HMPREF1058_RS00395 hypothetical protein - insig.

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