Gene info for HMPREF1058_RS00405 in Phocaeicola vulgatus CL09T03C04

Annotation: M28 family peptidase
Type 1: Protein-coding gene
Located on scaffold NZ_JH724290, + strand, nucleotides 80,004 to 81,497
See nucleotide sequence around HMPREF1058_RS00405 or for all of scaffold NZ_JH724290

Other databases: NCBI, uniprot: I9TTC3

Nearby Genes

500 ntHMPREF1058_RS00430 and HMPREF1058_RS00425 are separated by 162 nucleotidesHMPREF1058_RS00425 and HMPREF1058_RS00420 are separated by 22 nucleotidesHMPREF1058_RS00420 and HMPREF1058_RS00415 are separated by 75 nucleotidesHMPREF1058_RS00415 and HMPREF1058_RS00410 are separated by 93 nucleotidesHMPREF1058_RS00410 and HMPREF1058_RS00405 are separated by 162 nucleotidesHMPREF1058_RS00405 and HMPREF1058_RS00400 are separated by 97 nucleotidesHMPREF1058_RS00400 and HMPREF1058_RS00395 overlap by 4 nucleotidesHMPREF1058_RS00395 and HMPREF1058_RS00390 are separated by 14 nucleotidesHMPREF1058_RS00390 and HMPREF1058_RS00385 are separated by 185 nucleotidesHMPREF1058_RS00385 and HMPREF1058_RS00380 are separated by 23 nucleotides HMPREF1058_RS00430: HMPREF1058_RS00430 - DUF4488 domain-containing protein, at 73,430 to 73,924 _RS00430 HMPREF1058_RS00425: HMPREF1058_RS00425 - asparagine--tRNA ligase, at 74,087 to 75,490 _RS00425 HMPREF1058_RS00420: HMPREF1058_RS00420 - pseudouridine synthase, at 75,513 to 76,976 _RS00420 HMPREF1058_RS00415: HMPREF1058_RS00415 - adenylosuccinate lyase, at 77,052 to 78,398 _RS00415 HMPREF1058_RS00410: HMPREF1058_RS00410 - MATE family efflux transporter, at 78,492 to 79,841 _RS00410 HMPREF1058_RS00405: HMPREF1058_RS00405 - M28 family peptidase, at 80,004 to 81,497 _RS00405 HMPREF1058_RS00400: HMPREF1058_RS00400 - GntR family transcriptional regulator, at 81,595 to 81,960 _RS00400 HMPREF1058_RS00395: HMPREF1058_RS00395 - hypothetical protein, at 81,957 to 82,850 _RS00395 HMPREF1058_RS00390: HMPREF1058_RS00390 - ATP-binding cassette domain-containing protein, at 82,865 to 83,707 _RS00390 HMPREF1058_RS00385: HMPREF1058_RS00385 - tetratricopeptide repeat protein, at 83,893 to 85,308 _RS00385 HMPREF1058_RS00380: HMPREF1058_RS00380 - substrate-binding domain-containing protein, at 85,332 to 86,276 _RS00380
Locus Name Description Strand Phenotype
HMPREF1058_RS00430 HMPREF1058_RS00430 DUF4488 domain-containing protein - cofit
HMPREF1058_RS00425 HMPREF1058_RS00425 asparagine--tRNA ligase - no data
HMPREF1058_RS00420 HMPREF1058_RS00420 pseudouridine synthase - no data
HMPREF1058_RS00415 HMPREF1058_RS00415 adenylosuccinate lyase - no data
HMPREF1058_RS00410 HMPREF1058_RS00410 MATE family efflux transporter - cofit
HMPREF1058_RS00405 HMPREF1058_RS00405 M28 family peptidase + insig.
HMPREF1058_RS00400 HMPREF1058_RS00400 GntR family transcriptional regulator - strong
HMPREF1058_RS00395 HMPREF1058_RS00395 hypothetical protein - insig.
HMPREF1058_RS00390 HMPREF1058_RS00390 ATP-binding cassette domain-containing protein - cofit
HMPREF1058_RS00385 HMPREF1058_RS00385 tetratricopeptide repeat protein - insig.
HMPREF1058_RS00380 HMPREF1058_RS00380 substrate-binding domain-containing protein - insig.

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