Gene info for HMPREF1058_RS00045 in Phocaeicola vulgatus CL09T03C04

Annotation: SusC/RagA family TonB-linked outer membrane protein
Type 1: Protein-coding gene
Located on scaffold NZ_JH724291, - strand, nucleotides 81,240 to 84,089
See nucleotide sequence around HMPREF1058_RS00045 or for all of scaffold NZ_JH724291

Other databases: NCBI, uniprot: I8ZB09

Nearby Genes

500 ntHMPREF1058_RS00065 and HMPREF1058_RS00060 are separated by 85 nucleotidesHMPREF1058_RS00060 and HMPREF1058_RS21730 are separated by 91 nucleotidesHMPREF1058_RS21730 and HMPREF1058_RS00055 are separated by 843 nucleotidesHMPREF1058_RS00055 and HMPREF1058_RS00050 are separated by 83 nucleotidesHMPREF1058_RS00050 and HMPREF1058_RS00045 are separated by 28 nucleotidesHMPREF1058_RS00045 and HMPREF1058_RS00040 are separated by 40 nucleotidesHMPREF1058_RS00040 and HMPREF1058_RS00035 are separated by 18 nucleotides HMPREF1058_RS00065: HMPREF1058_RS00065 - family 78 glycoside hydrolase catalytic domain, at 74,677 to 76,458 _RS00065 HMPREF1058_RS00060: HMPREF1058_RS00060 - RagB/SusD family nutrient uptake outer membrane protein, at 76,544 to 77,533 _RS00060 HMPREF1058_RS21730: HMPREF1058_RS21730 - hypothetical protein, at 77,625 to 77,792 _RS21730 HMPREF1058_RS00055: HMPREF1058_RS00055 - hypothetical protein, at 78,636 to 79,430 _RS00055 HMPREF1058_RS00050: HMPREF1058_RS00050 - RagB/SusD family nutrient uptake outer membrane protein, at 79,514 to 81,211 _RS00050 HMPREF1058_RS00045: HMPREF1058_RS00045 - SusC/RagA family TonB-linked outer membrane protein, at 81,240 to 84,089 _RS00045 HMPREF1058_RS00040: HMPREF1058_RS00040 - RagB/SusD family nutrient uptake outer membrane protein, at 84,130 to 86,106 _RS00040 HMPREF1058_RS00035: HMPREF1058_RS00035 - TonB-dependent receptor, at 86,125 to 89,307 _RS00035
Locus Name Description Strand Phenotype
HMPREF1058_RS00065 HMPREF1058_RS00065 family 78 glycoside hydrolase catalytic domain - insig.
HMPREF1058_RS00060 HMPREF1058_RS00060 RagB/SusD family nutrient uptake outer membrane protein - insig.
HMPREF1058_RS21730 HMPREF1058_RS21730 hypothetical protein + insig.
HMPREF1058_RS00055 HMPREF1058_RS00055 hypothetical protein - insig.
HMPREF1058_RS00050 HMPREF1058_RS00050 RagB/SusD family nutrient uptake outer membrane protein - cofit
HMPREF1058_RS00045 HMPREF1058_RS00045 SusC/RagA family TonB-linked outer membrane protein - cofit
HMPREF1058_RS00040 HMPREF1058_RS00040 RagB/SusD family nutrient uptake outer membrane protein - sig.
HMPREF1058_RS00035 HMPREF1058_RS00035 TonB-dependent receptor - cofit

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