Gene info for Ga0059261_3694 in Sphingomonas koreensis DSMZ 15582

Updated annotation (from data): threonine deaminase (EC 4.3.1.19)
Rationale: Important for fitness in most defined media. Hits TIGR01127.
Original annotation: threonine ammonia-lyase, medium form
Type 1: Protein-coding gene
Located on scaffold Ga0059261_unitig_0_quiver.1, - strand, nucleotides 3,806,719 to 3,807,981
See nucleotide sequence around Ga0059261_3694 or for all of scaffold Ga0059261_unitig_0_quiver.1

Other databases: NCBI, uniprot: A0A2M8WHH4

Nearby Genes

500 ntGa0059261_3689 and Ga0059261_3690 are separated by 178 nucleotidesGa0059261_3690 and Ga0059261_3691 overlap by 1 nucleotidesGa0059261_3691 and Ga0059261_3692 are separated by 7 nucleotidesGa0059261_3692 and Ga0059261_3693 are separated by 3 nucleotidesGa0059261_3693 and Ga0059261_3694 are separated by 420 nucleotidesGa0059261_3694 and Ga0059261_3695 are separated by 78 nucleotidesGa0059261_3695 and Ga0059261_3696 are separated by 907 nucleotidesGa0059261_3696 and Ga0059261_3697 overlap by 4 nucleotidesGa0059261_3697 and Ga0059261_3698 are separated by 132 nucleotidesGa0059261_3698 and Ga0059261_3699 are separated by 342 nucleotides Ga0059261_3689: Ga0059261_3689 - Peroxiredoxin, at 3,801,507 to 3,802,112 _3689 Ga0059261_3690: Ga0059261_3690 - Uncharacterized conserved protein, at 3,802,291 to 3,803,763 _3690 Ga0059261_3691: Ga0059261_3691 - Uncharacterized protein conserved in bacteria, at 3,803,763 to 3,804,704 _3691 Ga0059261_3692: Ga0059261_3692 - Transglutaminase-like enzymes, putative cysteine proteases, at 3,804,712 to 3,805,521 _3692 Ga0059261_3693: Ga0059261_3693 - Putative arginyl-tRNA:protein arginylyltransferase, at 3,805,525 to 3,806,298 _3693 Ga0059261_3694: Ga0059261_3694 - threonine deaminase (EC 4.3.1.19) (from data), at 3,806,719 to 3,807,981 _3694 Ga0059261_3695: Ga0059261_3695 - Predicted metal-dependent hydrolase with the TIM-barrel fold, at 3,808,060 to 3,809,736 _3695 Ga0059261_3696: Ga0059261_3696 - hypothetical protein, at 3,810,644 to 3,811,018 _3696 Ga0059261_3697: Ga0059261_3697 - Predicted transcriptional regulators, at 3,811,015 to 3,811,311 _3697 Ga0059261_3698: Ga0059261_3698 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,811,444 to 3,812,151 _3698 Ga0059261_3699: Ga0059261_3699 - TonB dependent receptor/TonB-dependent Receptor Plug Domain, at 3,812,494 to 3,815,496 _3699
Locus Name Description Strand Phenotype
Ga0059261_3689 Ga0059261_3689 Peroxiredoxin + insig.
Ga0059261_3690 Ga0059261_3690 Uncharacterized conserved protein + insig.
Ga0059261_3691 Ga0059261_3691 Uncharacterized protein conserved in bacteria + insig.
Ga0059261_3692 Ga0059261_3692 Transglutaminase-like enzymes, putative cysteine proteases + insig.
Ga0059261_3693 Ga0059261_3693 Putative arginyl-tRNA:protein arginylyltransferase - strong
Ga0059261_3694 Ga0059261_3694 threonine deaminase (EC 4.3.1.19) (from data) - strong
Ga0059261_3695 Ga0059261_3695 Predicted metal-dependent hydrolase with the TIM-barrel fold + strong
Ga0059261_3696 Ga0059261_3696 hypothetical protein - insig.
Ga0059261_3697 Ga0059261_3697 Predicted transcriptional regulators - insig.
Ga0059261_3698 Ga0059261_3698 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - cofit
Ga0059261_3699 Ga0059261_3699 TonB dependent receptor/TonB-dependent Receptor Plug Domain + insig.

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