Gene info for Ga0059261_2194 in Sphingomonas koreensis DSMZ 15582

Updated annotation (from data): shikimate dehydrogenase (EC 1.1.1.25)
Rationale: Cofit with other chorismate synthesis genes. Also known as BDW16_RS10815, which complements an aroE- strain of E. coli (data of PMID:39375541)
Original annotation: shikimate dehydrogenase (EC 1.1.1.25)
Type 1: Protein-coding gene
Located on scaffold Ga0059261_unitig_0_quiver.1, - strand, nucleotides 2,301,224 to 2,302,036
See nucleotide sequence around Ga0059261_2194 or for all of scaffold Ga0059261_unitig_0_quiver.1

Other databases: NCBI, uniprot: A0A2M8WD96

Nearby Genes

500 ntGa0059261_2189 and Ga0059261_2190 overlap by 17 nucleotidesGa0059261_2190 and Ga0059261_2191 are separated by 10 nucleotidesGa0059261_2191 and Ga0059261_2192 are separated by 49 nucleotidesGa0059261_2192 and Ga0059261_2193 are separated by 7 nucleotidesGa0059261_2193 and Ga0059261_2194 are separated by 10 nucleotidesGa0059261_2194 and Ga0059261_2195 overlap by 4 nucleotidesGa0059261_2195 and Ga0059261_2196 overlap by 4 nucleotidesGa0059261_2196 and Ga0059261_2197 are separated by 297 nucleotidesGa0059261_2197 and Ga0059261_2198 overlap by 4 nucleotidesGa0059261_2198 and Ga0059261_2199 are separated by 150 nucleotides Ga0059261_2189: Ga0059261_2189 - uncharacterized domain 1, at 2,298,366 to 2,298,827 _2189 Ga0059261_2190: Ga0059261_2190 - PTS IIA-like nitrogen-regulatory protein PtsN, at 2,298,811 to 2,299,281 _2190 Ga0059261_2191: Ga0059261_2191 - ribosomal subunit interface protein, at 2,299,292 to 2,299,870 _2191 Ga0059261_2192: Ga0059261_2192 - DNA polymerase III, epsilon subunit, Proteobacterial, at 2,299,920 to 2,300,612 _2192 Ga0059261_2193: Ga0059261_2193 - dephospho-CoA kinase, at 2,300,620 to 2,301,213 _2193 Ga0059261_2194: Ga0059261_2194 - shikimate dehydrogenase (EC 1.1.1.25) (from data), at 2,301,224 to 2,302,036 _2194 Ga0059261_2195: Ga0059261_2195 - Nucleotide-binding protein implicated in inhibition of septum formation, at 2,302,033 to 2,302,620 _2195 Ga0059261_2196: Ga0059261_2196 - Uncharacterized protein conserved in bacteria, at 2,302,617 to 2,303,444 _2196 Ga0059261_2197: Ga0059261_2197 - uroporphyrinogen decarboxylase (EC 4.1.1.37), at 2,303,742 to 2,304,797 _2197 Ga0059261_2198: Ga0059261_2198 - Predicted membrane protein, at 2,304,794 to 2,305,249 _2198 Ga0059261_2199: Ga0059261_2199 - transcription termination factor Rho, at 2,305,400 to 2,306,656 _2199
Locus Name Description Strand Phenotype
Ga0059261_2189 Ga0059261_2189 uncharacterized domain 1 - strong
Ga0059261_2190 Ga0059261_2190 PTS IIA-like nitrogen-regulatory protein PtsN - strong
Ga0059261_2191 Ga0059261_2191 ribosomal subunit interface protein - strong
Ga0059261_2192 Ga0059261_2192 DNA polymerase III, epsilon subunit, Proteobacterial - no data
Ga0059261_2193 Ga0059261_2193 dephospho-CoA kinase - no data
Ga0059261_2194 Ga0059261_2194 shikimate dehydrogenase (EC 1.1.1.25) (from data) - strong
Ga0059261_2195 Ga0059261_2195 Nucleotide-binding protein implicated in inhibition of septum formation - sig.
Ga0059261_2196 Ga0059261_2196 Uncharacterized protein conserved in bacteria - strong
Ga0059261_2197 Ga0059261_2197 uroporphyrinogen decarboxylase (EC 4.1.1.37) + no data
Ga0059261_2198 Ga0059261_2198 Predicted membrane protein + no data
Ga0059261_2199 Ga0059261_2199 transcription termination factor Rho + no data

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