Gene info for Ga0059261_1895 in Sphingomonas koreensis DSMZ 15582

Updated annotation (from data): 2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141)
Rationale: Specifically important in carbon source D-Xylose. 31% identical to HVO_B0027, which is 2-keto-3-deoxyxylonate dehydratase (see PMC2785657). Ga0059261_1895 is also 61% identical to xylX from Caulobacter crescentus, which is also required for xylose utilization (PMC1855722) and is believed to have this activity as well.
Original annotation: Fumarylacetoacetate (FAA) hydrolase family protein
Type 1: Protein-coding gene
Located on scaffold Ga0059261_unitig_0_quiver.1, - strand, nucleotides 2,004,395 to 2,005,525
See nucleotide sequence around Ga0059261_1895 or for all of scaffold Ga0059261_unitig_0_quiver.1

Other databases: NCBI, uniprot: A0A1L6J6G9

Nearby Genes

500 ntGa0059261_1890 and Ga0059261_1891 are separated by 79 nucleotidesGa0059261_1891 and Ga0059261_1892 are separated by 55 nucleotidesGa0059261_1892 and Ga0059261_1893 overlap by 4 nucleotidesGa0059261_1893 and Ga0059261_1894 overlap by 1 nucleotidesGa0059261_1894 and Ga0059261_1895 are separated by 2 nucleotidesGa0059261_1895 and Ga0059261_1896 are separated by 78 nucleotidesGa0059261_1896 and Ga0059261_1897 are separated by 155 nucleotidesGa0059261_1897 and Ga0059261_1898 are separated by 95 nucleotidesGa0059261_1898 and Ga0059261_1899 are separated by 163 nucleotidesGa0059261_1899 and Ga0059261_1900 are separated by 28 nucleotides Ga0059261_1890: Ga0059261_1890 - transcriptional regulator, LacI family, at 1,999,311 to 2,000,360 _1890 Ga0059261_1891: Ga0059261_1891 - MFS transporter, sugar porter (SP) family, at 2,000,440 to 2,001,840 _1891 Ga0059261_1892: Ga0059261_1892 - Galactose mutarotase and related enzymes, at 2,001,896 to 2,002,729 _1892 Ga0059261_1893: Ga0059261_1893 - Xylonolactonase (EC 3.1.1.68) (from data), at 2,002,726 to 2,003,613 _1893 Ga0059261_1894: Ga0059261_1894 - D-xylose 1-dehydrogenase (EC 1.1.1.175) (from data), at 2,003,613 to 2,004,392 _1894 Ga0059261_1895: Ga0059261_1895 - 2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141) (from data), at 2,004,395 to 2,005,525 _1895 Ga0059261_1896: Ga0059261_1896 - Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data), at 2,005,604 to 2,007,178 _1896 Ga0059261_1897: Ga0059261_1897 - Transcriptional regulators, at 2,007,334 to 2,008,080 _1897 Ga0059261_1898: Ga0059261_1898 - TonB-dependent receptor, at 2,008,176 to 2,011,028 _1898 Ga0059261_1899: Ga0059261_1899 - Lysophospholipase L1 and related esterases, at 2,011,192 to 2,012,067 _1899 Ga0059261_1900: Ga0059261_1900 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 2,012,096 to 2,012,848 _1900
Locus Name Description Strand Phenotype
Ga0059261_1890 Ga0059261_1890 transcriptional regulator, LacI family + insig.
Ga0059261_1891 Ga0059261_1891 MFS transporter, sugar porter (SP) family + insig.
Ga0059261_1892 Ga0059261_1892 Galactose mutarotase and related enzymes - insig.
Ga0059261_1893 Ga0059261_1893 Xylonolactonase (EC 3.1.1.68) (from data) - strong
Ga0059261_1894 Ga0059261_1894 D-xylose 1-dehydrogenase (EC 1.1.1.175) (from data) - strong
Ga0059261_1895 Ga0059261_1895 2-keto-3-deoxyxylonate dehydratase (EC 4.2.1.141) (from data) - strong
Ga0059261_1896 Ga0059261_1896 Ketoglutarate semialdehyde dehydrogenase (EC 1.2.1.26) (from data) - strong
Ga0059261_1897 Ga0059261_1897 Transcriptional regulators - insig.
Ga0059261_1898 Ga0059261_1898 TonB-dependent receptor - insig.
Ga0059261_1899 Ga0059261_1899 Lysophospholipase L1 and related esterases - insig.
Ga0059261_1900 Ga0059261_1900 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) - insig.

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