Gene info for Ga0059261_1047 in Sphingomonas koreensis DSMZ 15582

Updated annotation (from data): 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Rationale: Important for fitness in most defined media. Semi-automated annotation based on the auxotrophic phenotype and a hit to HMM TIGR00007.
Original annotation: 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase (EC 5.3.1.16)
Type 1: Protein-coding gene
Located on scaffold Ga0059261_unitig_0_quiver.1, + strand, nucleotides 1,080,470 to 1,081,198
See nucleotide sequence around Ga0059261_1047 or for all of scaffold Ga0059261_unitig_0_quiver.1

Other databases: NCBI, uniprot: A0A2M8WA89

Nearby Genes

500 ntGa0059261_1042 and Ga0059261_1043 are separated by 30 nucleotidesGa0059261_1043 and Ga0059261_1044 are separated by 52 nucleotidesGa0059261_1044 and Ga0059261_1045 overlap by 1 nucleotidesGa0059261_1045 and Ga0059261_1046 overlap by 4 nucleotidesGa0059261_1046 and Ga0059261_1047 overlap by 4 nucleotidesGa0059261_1047 and Ga0059261_1048 overlap by 4 nucleotidesGa0059261_1048 and Ga0059261_1049 are separated by 123 nucleotidesGa0059261_1049 and Ga0059261_1050 are separated by 41 nucleotidesGa0059261_1050 and Ga0059261_1051 are separated by 32 nucleotidesGa0059261_1051 and Ga0059261_1052 overlap by 11 nucleotides Ga0059261_1042: Ga0059261_1042 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 1,077,580 to 1,078,353 _1042 Ga0059261_1043: Ga0059261_1043 - Uncharacterized protein conserved in bacteria, at 1,078,384 to 1,078,953 _1043 Ga0059261_1044: Ga0059261_1044 - imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19), at 1,079,006 to 1,079,593 _1044 Ga0059261_1045: Ga0059261_1045 - Uncharacterized protein conserved in bacteria, at 1,079,593 to 1,079,877 _1045 Ga0059261_1046: Ga0059261_1046 - imidazole glycerol phosphate synthase, glutamine amidotransferase subunit, at 1,079,874 to 1,080,473 _1046 Ga0059261_1047: Ga0059261_1047 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data), at 1,080,470 to 1,081,198 _1047 Ga0059261_1048: Ga0059261_1048 - imidazoleglycerol phosphate synthase, cyclase subunit, at 1,081,195 to 1,081,962 _1048 Ga0059261_1049: Ga0059261_1049 - PEP-CTERM protein-sorting domain, at 1,082,086 to 1,082,349 _1049 Ga0059261_1050: Ga0059261_1050 - hypothetical protein, at 1,082,391 to 1,082,573 _1050 Ga0059261_1051: Ga0059261_1051 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data), at 1,082,606 to 1,082,929 _1051 Ga0059261_1052: Ga0059261_1052 - Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases, at 1,082,919 to 1,083,296 _1052
Locus Name Description Strand Phenotype
Ga0059261_1042 Ga0059261_1042 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) + insig.
Ga0059261_1043 Ga0059261_1043 Uncharacterized protein conserved in bacteria - strong
Ga0059261_1044 Ga0059261_1044 imidazoleglycerol-phosphate dehydratase (EC 4.2.1.19) + strong
Ga0059261_1045 Ga0059261_1045 Uncharacterized protein conserved in bacteria + no data
Ga0059261_1046 Ga0059261_1046 imidazole glycerol phosphate synthase, glutamine amidotransferase subunit + strong
Ga0059261_1047 Ga0059261_1047 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) + strong
Ga0059261_1048 Ga0059261_1048 imidazoleglycerol phosphate synthase, cyclase subunit + strong
Ga0059261_1049 Ga0059261_1049 PEP-CTERM protein-sorting domain + insig.
Ga0059261_1050 Ga0059261_1050 hypothetical protein + insig.
Ga0059261_1051 Ga0059261_1051 phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) + strong
Ga0059261_1052 Ga0059261_1052 Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases + insig.

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