Gene info for PGA1_c08960 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): DNA repair endonuclease mmcB (DUF1052)
Rationale: Conserved and specific phenotype: important for resisting cisplatin. Also see PMID:26162909 which suggests a role for a homologous protein from Caulobacter in creating substrates for translesion synthesis
Original annotation: Uncharacterized protein conserved in bacteria
Type 1: Protein-coding gene
Located on scaffold PGA1_c, + strand, nucleotides 925,190 to 925,645
See nucleotide sequence around PGA1_c08960 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510179462, uniprot: I7EV52

Nearby Genes

500 ntPGA1_c08910 and PGA1_c08920 are separated by 355 nucleotidesPGA1_c08920 and PGA1_c08930 are separated by 1 nucleotidesPGA1_c08930 and PGA1_c08940 overlap by 4 nucleotidesPGA1_c08940 and PGA1_c08950 are separated by 232 nucleotidesPGA1_c08950 and PGA1_c08960 are separated by 426 nucleotidesPGA1_c08960 and PGA1_c08970 are separated by 19 nucleotidesPGA1_c08970 and PGA1_c08980 are separated by 205 nucleotidesPGA1_c08980 and PGA1_c08990 are separated by 142 nucleotidesPGA1_c08990 and PGA1_c09000 overlap by 2 nucleotidesPGA1_c09000 and PGA1_c09010 are separated by 220 nucleotides PGA1_c08910: PGA1_c08910 - riboflavin synthase alpha chain, at 921,090 to 921,683 _c08910 PGA1_c08920: PGA1_c08920 - 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB, at 922,039 to 923,160 _c08920 PGA1_c08930: PGA1_c08930 - 6,7-dimethyl-8-ribityllumazine synthase RibH, at 923,162 to 923,713 _c08930 PGA1_c08940: PGA1_c08940 - N utilization substance protein B homolog, at 923,710 to 924,201 _c08940 PGA1_c08950: PGA1_c08950 - hypothetical protein, at 924,434 to 924,763 _c08950 PGA1_c08960: PGA1_c08960 - DNA repair endonuclease mmcB (DUF1052) (from data), at 925,190 to 925,645 _c08960 PGA1_c08970: PGA1_c08970 - hypothetical protein, at 925,665 to 925,853 _c08970 PGA1_c08980: PGA1_c08980 - tRNA-His, at 926,059 to 926,135 _c08980 PGA1_c08990: PGA1_c08990 - hypothetical protein, at 926,278 to 926,592 _c08990 PGA1_c09000: PGA1_c09000 - ribosomal large subunit pseudouridine synthase D, at 926,591 to 927,625 _c09000 PGA1_c09010: PGA1_c09010 - RNA polymerase sigma-32 factor RpoH, at 927,846 to 928,742 _c09010
Locus Name Description Strand Phenotype
PGA1_c08910 PGA1_c08910 riboflavin synthase alpha chain + no data
PGA1_c08920 PGA1_c08920 3,4-dihydroxy-2-butanone 4-phosphate synthase RibB + insig.
PGA1_c08930 PGA1_c08930 6,7-dimethyl-8-ribityllumazine synthase RibH + insig.
PGA1_c08940 PGA1_c08940 N utilization substance protein B homolog + no data
PGA1_c08950 PGA1_c08950 hypothetical protein + insig.
PGA1_c08960 PGA1_c08960 DNA repair endonuclease mmcB (DUF1052) (from data) + strong
PGA1_c08970 PGA1_c08970 hypothetical protein - no data
PGA1_c08980 PGA1_c08980 tRNA-His + no data
PGA1_c08990 PGA1_c08990 hypothetical protein - sig.
PGA1_c09000 PGA1_c09000 ribosomal large subunit pseudouridine synthase D + strong
PGA1_c09010 PGA1_c09010 RNA polymerase sigma-32 factor RpoH + no data

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