Gene info for PGA1_262p00440 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): glucose transporter, permease component
Rationale: specific phenotype on glucose and cofit with nearby xylF (PGA1_262p00430) and xylG (PGA1_262p00450). This is similar to the gxyB (Atu3575) of Agrobacterium tumefaciens, which is involved in the transport of glucose, glucosamine, and xylose (PMCID: PMC4135649). It is not clear if the Phaeobacter system transports xylose, as it is not required for utilizing xylose, but no other xylose transport system was identified either.
Original annotation: xylose transport system permease protein XylH
Type 1: Protein-coding gene
Located on scaffold PGA1_262p, + strand, nucleotides 52,971 to 54,272
See nucleotide sequence around PGA1_262p00440 or for all of scaffold PGA1_262p

Other databases: NCBI, IMG: 2510182226, uniprot: I7DWB0

Nearby Genes

500 ntPGA1_262p00390 and PGA1_262p00400 overlap by 8 nucleotidesPGA1_262p00400 and PGA1_262p00410 are separated by 11 nucleotidesPGA1_262p00410 and PGA1_262p00420 overlap by 11 nucleotidesPGA1_262p00420 and PGA1_262p00430 are separated by 186 nucleotidesPGA1_262p00430 and PGA1_262p00440 are separated by 118 nucleotidesPGA1_262p00440 and PGA1_262p00450 overlap by 4 nucleotidesPGA1_262p00450 and PGA1_262p00460 are separated by 122 nucleotidesPGA1_262p00460 and PGA1_262p00470 are separated by 0 nucleotidesPGA1_262p00470 and PGA1_262p00480 overlap by 17 nucleotidesPGA1_262p00480 and PGA1_262p00490 are separated by 38 nucleotides PGA1_262p00390: PGA1_262p00390 - aldose 1-epimerase, at 46,465 to 47,523 _262p00390 PGA1_262p00400: PGA1_262p00400 - putative cytochrome c peroxidase, at 47,516 to 48,868 _262p00400 PGA1_262p00410: PGA1_262p00410 - ASPIC and UnbV., at 48,880 to 50,436 _262p00410 PGA1_262p00420: PGA1_262p00420 - Transcriptional regulator/sugar kinase, at 50,426 to 51,640 _262p00420 PGA1_262p00430: PGA1_262p00430 - glucose transporter, periplasmic substrate-binding component (from data), at 51,827 to 52,852 _262p00430 PGA1_262p00440: PGA1_262p00440 - glucose transporter, permease component (from data), at 52,971 to 54,272 _262p00440 PGA1_262p00450: PGA1_262p00450 - glucose transporter, ATPase component (from data), at 54,269 to 55,051 _262p00450 PGA1_262p00460: PGA1_262p00460 - transcriptional regulator, MerR family, at 55,174 to 55,602 _262p00460 PGA1_262p00470: PGA1_262p00470 - Plasmid stabilization system protein, at 55,603 to 55,971 _262p00470 PGA1_262p00480: PGA1_262p00480 - putative addiction module antidote protein, CC2985 family, at 55,955 to 56,230 _262p00480 PGA1_262p00490: PGA1_262p00490 - hypothetical protein, at 56,269 to 56,991 _262p00490
Locus Name Description Strand Phenotype
PGA1_262p00390 PGA1_262p00390 aldose 1-epimerase + insig.
PGA1_262p00400 PGA1_262p00400 putative cytochrome c peroxidase + insig.
PGA1_262p00410 PGA1_262p00410 ASPIC and UnbV. - insig.
PGA1_262p00420 PGA1_262p00420 Transcriptional regulator/sugar kinase - sig.
PGA1_262p00430 PGA1_262p00430 glucose transporter, periplasmic substrate-binding component (from data) + strong
PGA1_262p00440 PGA1_262p00440 glucose transporter, permease component (from data) + strong
PGA1_262p00450 PGA1_262p00450 glucose transporter, ATPase component (from data) + insig.
PGA1_262p00460 PGA1_262p00460 transcriptional regulator, MerR family + strong
PGA1_262p00470 PGA1_262p00470 Plasmid stabilization system protein - insig.
PGA1_262p00480 PGA1_262p00480 putative addiction module antidote protein, CC2985 family - no data
PGA1_262p00490 PGA1_262p00490 hypothetical protein - sig.

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