Gene info for Psest_3513 in Pseudomonas stutzeri RCH2

Updated annotation (from data): Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
Rationale: Specifically important for utilizing L-tyrosine disodium salt. Automated validation from mutant phenotype: the predicted function (HOMOGENTISATE-12-DIOXYGENASE-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: Homogentisate 1,2-dioxygenase
Type 1: Protein-coding gene
Located on scaffold Psest_Contig47.1, - strand, nucleotides 3,688,637 to 3,689,776
See nucleotide sequence around Psest_3513 or for all of scaffold Psest_Contig47.1

Other databases: NCBI, IMG: 2507213745, uniprot: L0GQE9

Nearby Genes

500 ntPsest_3508 and Psest_3509 are separated by 123 nucleotidesPsest_3509 and Psest_3510 are separated by 232 nucleotidesPsest_3510 and Psest_3511 are separated by 81 nucleotidesPsest_3511 and Psest_3512 overlap by 11 nucleotidesPsest_3512 and Psest_3513 overlap by 1 nucleotidesPsest_3513 and Psest_3514 are separated by 164 nucleotidesPsest_3514 and Psest_3515 are separated by 391 nucleotidesPsest_3515 and Psest_3516 are separated by 128 nucleotidesPsest_3516 and Psest_3517 are separated by 145 nucleotidesPsest_3517 and Psest_3518 are separated by 241 nucleotides Psest_3508: Psest_3508 - Putative intracellular protease/amidase, at 3,682,537 to 3,683,217 _3508 Psest_3509: Psest_3509 - Methyl-accepting chemotaxis protein, at 3,683,341 to 3,685,230 _3509 Psest_3510: Psest_3510 - Na+-dependent transporters of the SNF family, at 3,685,463 to 3,686,923 _3510 Psest_3511: Psest_3511 - Maleylacetoacetate isomerase (EC 5.2.1.2) (from data), at 3,687,005 to 3,687,664 _3511 Psest_3512: Psest_3512 - fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data), at 3,687,654 to 3,688,637 _3512 Psest_3513: Psest_3513 - Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data), at 3,688,637 to 3,689,776 _3513 Psest_3514: Psest_3514 - 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data), at 3,689,941 to 3,691,026 _3514 Psest_3515: Psest_3515 - Na+-dependent transporters of the SNF family, at 3,691,418 to 3,692,827 _3515 Psest_3516: Psest_3516 - Leucine dehydrogenase (EC 1.4.1.9) (from data), at 3,692,956 to 3,694,050 _3516 Psest_3517: Psest_3517 - branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data), at 3,694,196 to 3,697,666 _3517 Psest_3518: Psest_3518 - Transcriptional regulators, at 3,697,908 to 3,698,378 _3518
Locus Name Description Strand Phenotype
Psest_3508 Psest_3508 Putative intracellular protease/amidase - insig.
Psest_3509 Psest_3509 Methyl-accepting chemotaxis protein - insig.
Psest_3510 Psest_3510 Na+-dependent transporters of the SNF family - strong
Psest_3511 Psest_3511 Maleylacetoacetate isomerase (EC 5.2.1.2) (from data) - strong
Psest_3512 Psest_3512 fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2) (from data) - strong
Psest_3513 Psest_3513 Homogentisate 1,2-dioxygenase (EC 1.13.11.5) (from data) - strong
Psest_3514 Psest_3514 4-hydroxyphenylpyruvate dioxygenase (EC 1.13.11.27) (from data) - strong
Psest_3515 Psest_3515 Na+-dependent transporters of the SNF family - sig.
Psest_3516 Psest_3516 Leucine dehydrogenase (EC 1.4.1.9) (from data) - strong
Psest_3517 Psest_3517 branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data) - strong
Psest_3518 Psest_3518 Transcriptional regulators + insig.

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