Gene info for PGA1_c33950 in Phaeobacter inhibens DSM 17395

Annotation: diaminopimelate epimerase DapF
Type 1: Protein-coding gene
Located on scaffold PGA1_c, + strand, nucleotides 3,559,187 to 3,560,032
See nucleotide sequence around PGA1_c33950 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510181928, uniprot: I7DVD0

Nearby Genes

500 ntPGA1_c33900 and PGA1_c33910 overlap by 4 nucleotidesPGA1_c33910 and PGA1_c33920 are separated by 70 nucleotidesPGA1_c33920 and PGA1_c33930 are separated by 349 nucleotidesPGA1_c33930 and PGA1_c33940 are separated by 273 nucleotidesPGA1_c33940 and PGA1_c33950 are separated by 211 nucleotidesPGA1_c33950 and PGA1_c33960 overlap by 4 nucleotidesPGA1_c33960 and PGA1_c33970 are separated by 43 nucleotidesPGA1_c33970 and PGA1_c33980 are separated by 159 nucleotidesPGA1_c33980 and PGA1_c33990 are separated by 18 nucleotidesPGA1_c33990 and PGA1_c34000 are separated by 11 nucleotides PGA1_c33900: PGA1_c33900 - TRAP transporter, subunit DctM, at 3,554,384 to 3,555,889 _c33900 PGA1_c33910: PGA1_c33910 - TRAP transporter, subunit DctQ, at 3,555,886 to 3,556,470 _c33910 PGA1_c33920: PGA1_c33920 - TRAP transporter, subunit DctP, at 3,556,541 to 3,557,587 _c33920 PGA1_c33930: PGA1_c33930 - fumarylacetoacetate hydrolase family protein, at 3,557,937 to 3,558,626 _c33930 PGA1_c33940: PGA1_c33940 - tRNA-Lys, at 3,558,900 to 3,558,975 _c33940 PGA1_c33950: PGA1_c33950 - diaminopimelate epimerase DapF, at 3,559,187 to 3,560,032 _c33950 PGA1_c33960: PGA1_c33960 - MiaB-like tRNA modifying enzyme, at 3,560,029 to 3,561,294 _c33960 PGA1_c33970: PGA1_c33970 - putative chloramphenicol phosphotransferase-like protein, at 3,561,338 to 3,561,859 _c33970 PGA1_c33980: PGA1_c33980 - cytochrome c1, at 3,562,019 to 3,562,810 _c33980 PGA1_c33990: PGA1_c33990 - cytochrome b, at 3,562,829 to 3,564,163 _c33990 PGA1_c34000: PGA1_c34000 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 3,564,175 to 3,564,735 _c34000
Locus Name Description Strand Phenotype
PGA1_c33900 PGA1_c33900 TRAP transporter, subunit DctM - insig.
PGA1_c33910 PGA1_c33910 TRAP transporter, subunit DctQ - insig.
PGA1_c33920 PGA1_c33920 TRAP transporter, subunit DctP - sig.
PGA1_c33930 PGA1_c33930 fumarylacetoacetate hydrolase family protein - insig.
PGA1_c33940 PGA1_c33940 tRNA-Lys - no data
PGA1_c33950 PGA1_c33950 diaminopimelate epimerase DapF + no data
PGA1_c33960 PGA1_c33960 MiaB-like tRNA modifying enzyme + strong
PGA1_c33970 PGA1_c33970 putative chloramphenicol phosphotransferase-like protein + insig.
PGA1_c33980 PGA1_c33980 cytochrome c1 - no data
PGA1_c33990 PGA1_c33990 cytochrome b - no data
PGA1_c34000 PGA1_c34000 ubiquinol-cytochrome c reductase iron-sulfur subunit - no data

Or browse nearby genes

Or see the comparative fitness browser