Gene info for PGA1_c30490 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): Malyl-CoA lyase (EC 4.1.3.24)
Rationale: Specifically important for utilizing Potassium acetate. Automated validation from mutant phenotype: the predicted function (4.1.3.24) was linked to the condition via a SEED subsystem. This annotation was also checked manually.
Original annotation: putative citrate lyase subunit beta
Type 1: Protein-coding gene
Located on scaffold PGA1_c, + strand, nucleotides 3,184,783 to 3,185,745
See nucleotide sequence around PGA1_c30490 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510181582, uniprot: I7DUE3

Nearby Genes

500 ntPGA1_c30440 and PGA1_c30450 are separated by 30 nucleotidesPGA1_c30450 and PGA1_c30460 are separated by 88 nucleotidesPGA1_c30460 and PGA1_c30470 are separated by 10 nucleotidesPGA1_c30470 and PGA1_c30480 are separated by 159 nucleotidesPGA1_c30480 and PGA1_c30490 are separated by 315 nucleotidesPGA1_c30490 and PGA1_c30500 are separated by 81 nucleotidesPGA1_c30500 and PGA1_c30510 are separated by 51 nucleotidesPGA1_c30510 and PGA1_c30520 are separated by 52 nucleotidesPGA1_c30520 and PGA1_c30530 are separated by 3 nucleotidesPGA1_c30530 and PGA1_c30540 are separated by 119 nucleotides PGA1_c30440: PGA1_c30440 - putative NADP-dependent oxidoreductase, at 3,179,645 to 3,180,676 _c30440 PGA1_c30450: PGA1_c30450 - putative DJ-1/PfpI family protein, at 3,180,707 to 3,181,381 _c30450 PGA1_c30460: PGA1_c30460 - D-alanine aminotransferase Dat, at 3,181,470 to 3,182,330 _c30460 PGA1_c30470: PGA1_c30470 - mandelate racemase / muconate lactonizing enzyme, at 3,182,341 to 3,183,306 _c30470 PGA1_c30480: PGA1_c30480 - Uncharacterized conserved protein, at 3,183,466 to 3,184,467 _c30480 PGA1_c30490: PGA1_c30490 - Malyl-CoA lyase (EC 4.1.3.24) (from data), at 3,184,783 to 3,185,745 _c30490 PGA1_c30500: PGA1_c30500 - hypothetical protein, at 3,185,827 to 3,186,432 _c30500 PGA1_c30510: PGA1_c30510 - putative leucine-responsive regulatory protein, at 3,186,484 to 3,186,936 _c30510 PGA1_c30520: PGA1_c30520 - translocator protein, LysE family, at 3,186,989 to 3,187,606 _c30520 PGA1_c30530: PGA1_c30530 - HTH-type transcriptional regulator, AraC family, at 3,187,610 to 3,188,446 _c30530 PGA1_c30540: PGA1_c30540 - acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, at 3,188,566 to 3,189,528 _c30540
Locus Name Description Strand Phenotype
PGA1_c30440 PGA1_c30440 putative NADP-dependent oxidoreductase + insig.
PGA1_c30450 PGA1_c30450 putative DJ-1/PfpI family protein + insig.
PGA1_c30460 PGA1_c30460 D-alanine aminotransferase Dat - strong
PGA1_c30470 PGA1_c30470 mandelate racemase / muconate lactonizing enzyme - strong
PGA1_c30480 PGA1_c30480 Uncharacterized conserved protein - strong
PGA1_c30490 PGA1_c30490 Malyl-CoA lyase (EC 4.1.3.24) (from data) + strong
PGA1_c30500 PGA1_c30500 hypothetical protein + insig.
PGA1_c30510 PGA1_c30510 putative leucine-responsive regulatory protein - insig.
PGA1_c30520 PGA1_c30520 translocator protein, LysE family + insig.
PGA1_c30530 PGA1_c30530 HTH-type transcriptional regulator, AraC family - insig.
PGA1_c30540 PGA1_c30540 acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha + no data

Or browse nearby genes

Or see the comparative fitness browser