Gene info for Psest_2235 in Pseudomonas stutzeri RCH2

Updated annotation (from data): DNA damage response nuclease
Rationale: Conserved and specific phenotype: important for resisting cisplatin. Contains a VRR-NUC domain that is predicted to have nuclease activity.
Original annotation: VRR-NUC domain.
Type 1: Protein-coding gene
Located on scaffold Psest_Contig47.1, + strand, nucleotides 2,386,609 to 2,388,246
See nucleotide sequence around Psest_2235 or for all of scaffold Psest_Contig47.1

Other databases: NCBI, IMG: 2507212467, uniprot: L0GLV3

Nearby Genes

500 ntPsest_2230 and Psest_2231 are separated by 70 nucleotidesPsest_2231 and Psest_2232 are separated by 34 nucleotidesPsest_2232 and Psest_2233 are separated by 595 nucleotidesPsest_2233 and Psest_2234 are separated by 235 nucleotidesPsest_2234 and Psest_2235 are separated by 139 nucleotidesPsest_2235 and Psest_2236 overlap by 4 nucleotidesPsest_2236 and Psest_2237 are separated by 89 nucleotidesPsest_2237 and Psest_2238 are separated by 260 nucleotidesPsest_2238 and Psest_2239 overlap by 1 nucleotidesPsest_2239 and Psest_2240 are separated by 136 nucleotides Psest_2230: Psest_2230 - Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes, at 2,379,905 to 2,381,263 _2230 Psest_2231: Psest_2231 - Lactoylglutathione lyase and related lyases, at 2,381,334 to 2,381,756 _2231 Psest_2232: Psest_2232 - UTP-glucose-1-phosphate uridylyltransferase, at 2,381,791 to 2,382,630 _2232 Psest_2233: Psest_2233 - Methyl-accepting chemotaxis protein, at 2,383,226 to 2,384,845 _2233 Psest_2234: Psest_2234 - oxygen-independent coproporphyrinogen III oxidase, at 2,385,081 to 2,386,469 _2234 Psest_2235: Psest_2235 - DNA damage response nuclease (from data), at 2,386,609 to 2,388,246 _2235 Psest_2236: Psest_2236 - Rad3-related DNA helicases, at 2,388,243 to 2,390,522 _2236 Psest_2237: Psest_2237 - tRNA_Leu_TAA, at 2,390,612 to 2,390,698 _2237 Psest_2238: Psest_2238 - hypothetical protein, at 2,390,959 to 2,391,366 _2238 Psest_2239: Psest_2239 - RES domain., at 2,391,366 to 2,392,052 _2239 Psest_2240: Psest_2240 - hypothetical protein, at 2,392,189 to 2,392,368 _2240
Locus Name Description Strand Phenotype
Psest_2230 Psest_2230 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes - sig.
Psest_2231 Psest_2231 Lactoylglutathione lyase and related lyases + insig.
Psest_2232 Psest_2232 UTP-glucose-1-phosphate uridylyltransferase - strong
Psest_2233 Psest_2233 Methyl-accepting chemotaxis protein + sig.
Psest_2234 Psest_2234 oxygen-independent coproporphyrinogen III oxidase + strong
Psest_2235 Psest_2235 DNA damage response nuclease (from data) + strong
Psest_2236 Psest_2236 Rad3-related DNA helicases + strong
Psest_2237 Psest_2237 tRNA_Leu_TAA + no data
Psest_2238 Psest_2238 hypothetical protein + insig.
Psest_2239 Psest_2239 RES domain. + insig.
Psest_2240 Psest_2240 hypothetical protein + sig.

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