Gene info for Psest_2125 in Pseudomonas stutzeri RCH2

Updated annotation (from data): D-gluconate TRAP transporter, periplasmic component
Rationale: specific phenotype on D-gluconate and no other transporter is apparent in the fitness data
Original annotation: tripartite ATP-independent periplasmic transporter solute receptor, DctP family
Type 1: Protein-coding gene
Located on scaffold Psest_Contig47.1, + strand, nucleotides 2,256,595 to 2,257,611
See nucleotide sequence around Psest_2125 or for all of scaffold Psest_Contig47.1

Other databases: NCBI, IMG: 2507212357, uniprot: L0GMV7

Nearby Genes

500 ntPsest_2120 and Psest_2121 are separated by 51 nucleotidesPsest_2121 and Psest_2122 are separated by 8 nucleotidesPsest_2122 and Psest_2123 are separated by 176 nucleotidesPsest_2123 and Psest_2124 are separated by 51 nucleotidesPsest_2124 and Psest_2125 are separated by 61 nucleotidesPsest_2125 and Psest_2126 are separated by 58 nucleotidesPsest_2126 and Psest_2127 are separated by 24 nucleotidesPsest_2127 and Psest_2128 are separated by 146 nucleotidesPsest_2128 and Psest_2129 are separated by 67 nucleotidesPsest_2129 and Psest_2130 are separated by 94 nucleotides Psest_2120: Psest_2120 - Transcriptional regulator, at 2,251,541 to 2,252,449 _2120 Psest_2121: Psest_2121 - Predicted ATPase, at 2,252,501 to 2,253,610 _2121 Psest_2122: Psest_2122 - Parvulin-like peptidyl-prolyl isomerase, at 2,253,619 to 2,253,897 _2122 Psest_2123: Psest_2123 - fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data), at 2,254,074 to 2,255,204 _2123 Psest_2124: Psest_2124 - D-gluconate TRAP transporter, large permease component (from data), at 2,255,256 to 2,256,533 _2124 Psest_2125: Psest_2125 - D-gluconate TRAP transporter, periplasmic component (from data), at 2,256,595 to 2,257,611 _2125 Psest_2126: Psest_2126 - Transcriptional regulators, at 2,257,670 to 2,258,689 _2126 Psest_2127: Psest_2127 - Transcriptional regulator, at 2,258,714 to 2,259,625 _2127 Psest_2128: Psest_2128 - Acyl-CoA dehydrogenases, at 2,259,772 to 2,260,998 _2128 Psest_2129: Psest_2129 - ABC-type phosphate transport system, periplasmic component, at 2,261,066 to 2,262,424 _2129 Psest_2130: Psest_2130 - exodeoxyribonuclease III, at 2,262,519 to 2,263,331 _2130
Locus Name Description Strand Phenotype
Psest_2120 Psest_2120 Transcriptional regulator + insig.
Psest_2121 Psest_2121 Predicted ATPase + sig.
Psest_2122 Psest_2122 Parvulin-like peptidyl-prolyl isomerase - insig.
Psest_2123 Psest_2123 fusion of gluconokinase (EC 2.7.1.12) and the small permease component of the D-gluconate TRAP transporter (from data) + insig.
Psest_2124 Psest_2124 D-gluconate TRAP transporter, large permease component (from data) + strong
Psest_2125 Psest_2125 D-gluconate TRAP transporter, periplasmic component (from data) + strong
Psest_2126 Psest_2126 Transcriptional regulators + strong
Psest_2127 Psest_2127 Transcriptional regulator - insig.
Psest_2128 Psest_2128 Acyl-CoA dehydrogenases + insig.
Psest_2129 Psest_2129 ABC-type phosphate transport system, periplasmic component - insig.
Psest_2130 Psest_2130 exodeoxyribonuclease III - sig.

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