Gene info for Psest_0205 in Pseudomonas stutzeri RCH2

Updated annotation (from data): tricarboxylate porin
Rationale: Specific phenotype: utilization of Tricitrate. Similar to P. aeruginosa OdpH
Original annotation: outer membrane porin, OprD family.
Type 1: Protein-coding gene
Located on scaffold Psest_Contig47.1, + strand, nucleotides 205,051 to 206,313
See nucleotide sequence around Psest_0205 or for all of scaffold Psest_Contig47.1

Other databases: NCBI, IMG: 2507210438, uniprot: L0GFL5

Nearby Genes

500 ntPsest_0200 and Psest_0201 are separated by 120 nucleotidesPsest_0201 and Psest_0202 are separated by 131 nucleotidesPsest_0202 and Psest_0203 overlap by 20 nucleotidesPsest_0203 and Psest_0204 overlap by 8 nucleotidesPsest_0204 and Psest_0205 are separated by 182 nucleotidesPsest_0205 and Psest_0206 are separated by 27 nucleotidesPsest_0206 and Psest_0207 are separated by 78 nucleotidesPsest_0207 and Psest_0208 are separated by 1 nucleotidesPsest_0208 and Psest_0209 are separated by 1 nucleotidesPsest_0209 and Psest_0210 overlap by 4 nucleotides Psest_0200: Psest_0200 - hypothetical protein, at 198,895 to 199,059 _0200 Psest_0201: Psest_0201 - PAS domain S-box, at 199,180 to 200,760 _0201 Psest_0202: Psest_0202 - diguanylate cyclase (GGDEF) domain, at 200,892 to 202,823 _0202 Psest_0203: Psest_0203 - Signal transduction histidine kinase, at 202,804 to 204,204 _0203 Psest_0204: Psest_0204 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 204,197 to 204,868 _0204 Psest_0205: Psest_0205 - tricarboxylate porin (from data), at 205,051 to 206,313 _0205 Psest_0206: Psest_0206 - Uncharacterized protein conserved in bacteria, at 206,341 to 207,315 _0206 Psest_0207: Psest_0207 - hypothetical protein, at 207,394 to 207,837 _0207 Psest_0208: Psest_0208 - Uncharacterized protein conserved in bacteria, at 207,839 to 209,353 _0208 Psest_0209: Psest_0209 - membrane protein AbrB duplication, at 209,355 to 210,383 _0209 Psest_0210: Psest_0210 - Na/Pi-cotransporter, at 210,380 to 212,065 _0210
Locus Name Description Strand Phenotype
Psest_0200 Psest_0200 hypothetical protein + no data
Psest_0201 Psest_0201 PAS domain S-box + sig.
Psest_0202 Psest_0202 diguanylate cyclase (GGDEF) domain + insig.
Psest_0203 Psest_0203 Signal transduction histidine kinase - strong
Psest_0204 Psest_0204 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain - strong
Psest_0205 Psest_0205 tricarboxylate porin (from data) + strong
Psest_0206 Psest_0206 Uncharacterized protein conserved in bacteria + strong
Psest_0207 Psest_0207 hypothetical protein + strong
Psest_0208 Psest_0208 Uncharacterized protein conserved in bacteria + strong
Psest_0209 Psest_0209 membrane protein AbrB duplication + insig.
Psest_0210 Psest_0210 Na/Pi-cotransporter - insig.

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