Gene info for PGA1_c14010 in Phaeobacter inhibens DSM 17395

Updated annotation (from data): Xylulose kinase (EC 2.7.1.17)
Rationale: Specifically important for utilizing D-Xylose. Automated validation from mutant phenotype: the predicted function (XYLULOKIN-RXN) was linked to the condition via a MetaCyc pathway. This annotation was also checked manually.
Original annotation: xylulose kinase XylB
Type 1: Protein-coding gene
Located on scaffold PGA1_c, + strand, nucleotides 1,450,010 to 1,451,446
See nucleotide sequence around PGA1_c14010 or for all of scaffold PGA1_c

Other databases: NCBI, IMG: 2510179963, uniprot: I7E053

Nearby Genes

500 ntPGA1_c13960 and PGA1_c13970 overlap by 4 nucleotidesPGA1_c13970 and PGA1_c13980 are separated by 92 nucleotidesPGA1_c13980 and PGA1_c13990 are separated by 196 nucleotidesPGA1_c13990 and PGA1_c14000 are separated by 2 nucleotidesPGA1_c14000 and PGA1_c14010 are separated by 39 nucleotidesPGA1_c14010 and PGA1_c14020 are separated by 501 nucleotidesPGA1_c14020 and PGA1_c14030 are separated by 11 nucleotidesPGA1_c14030 and PGA1_c14040 are separated by 246 nucleotidesPGA1_c14040 and PGA1_c14050 are separated by 185 nucleotidesPGA1_c14050 and PGA1_c14060 are separated by 110 nucleotides PGA1_c13960: PGA1_c13960 - putative mechanosensitive ion channel protein, at 1,444,006 to 1,446,495 _c13960 PGA1_c13970: PGA1_c13970 - threonyl/alanyl tRNA synthetase-like protein, at 1,446,492 to 1,447,223 _c13970 PGA1_c13980: PGA1_c13980 - tRNA-Ser, at 1,447,316 to 1,447,405 _c13980 PGA1_c13990: PGA1_c13990 - Novel Xylose regulator from LacI family (from data), at 1,447,602 to 1,448,663 _c13990 PGA1_c14000: PGA1_c14000 - Xylose isomerase (EC 5.3.1.5) (from data), at 1,448,666 to 1,449,970 _c14000 PGA1_c14010: PGA1_c14010 - Xylulose kinase (EC 2.7.1.17) (from data), at 1,450,010 to 1,451,446 _c14010 PGA1_c14020: PGA1_c14020 - hypothetical protein, at 1,451,948 to 1,452,565 _c14020 PGA1_c14030: PGA1_c14030 - Uncharacterized MobA-related protein, at 1,452,577 to 1,453,203 _c14030 PGA1_c14040: PGA1_c14040 - dimethylglycine dehydrogenase DmgdH, at 1,453,450 to 1,455,867 _c14040 PGA1_c14050: PGA1_c14050 - inner membrane protein, at 1,456,053 to 1,457,363 _c14050 PGA1_c14060: PGA1_c14060 - tyrosine recombinase XerD, at 1,457,474 to 1,458,487 _c14060
Locus Name Description Strand Phenotype
PGA1_c13960 PGA1_c13960 putative mechanosensitive ion channel protein + strong
PGA1_c13970 PGA1_c13970 threonyl/alanyl tRNA synthetase-like protein + insig.
PGA1_c13980 PGA1_c13980 tRNA-Ser + no data
PGA1_c13990 PGA1_c13990 Novel Xylose regulator from LacI family (from data) + strong
PGA1_c14000 PGA1_c14000 Xylose isomerase (EC 5.3.1.5) (from data) + strong
PGA1_c14010 PGA1_c14010 Xylulose kinase (EC 2.7.1.17) (from data) + strong
PGA1_c14020 PGA1_c14020 hypothetical protein + insig.
PGA1_c14030 PGA1_c14030 Uncharacterized MobA-related protein - insig.
PGA1_c14040 PGA1_c14040 dimethylglycine dehydrogenase DmgdH - insig.
PGA1_c14050 PGA1_c14050 inner membrane protein - no data
PGA1_c14060 PGA1_c14060 tyrosine recombinase XerD - strong

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